RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 RUNDC1Q96C34 613 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 PRIMPOLQ96LW4 560 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 FEZ1Q99689 392 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 NCAPGQ9BPX3 1015 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 PPP1R12CQ9BZL4 782 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 MRPL18Q9H0U6 180 aaKnown RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 STOML1Q9UBI4 398 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 USTQ9Y2C2 406 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 RAXQ9Y2V3 346 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 C5P01031 1676 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 UBR2Q8IWV8 1755 aa3.15□□□□□ -1.9
TRAV41-201ENST00000390468 ARHGEF10O15013 1369 aa3.15□□□□□ -1.9
TRAV41-201ENST00000390468 KIF24Q5T7B8 1368 aa3.15□□□□□ -1.9
TRAV41-201ENST00000390468 ADAMTS7Q9UKP4 1686 aa3.15□□□□□ -1.9
TRAV41-201ENST00000390468 APAF1O14727 1248 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 FOXO3O43524 673 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 ZNF500O60304 480 aaPredicted RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 XYLBO75191 536 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 MAP3K6O95382 1288 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 BRD1O95696 1058 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 IGLV1-40P01703 118 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 PSAPP07602 524 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 ZNF853P0CG23 659 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 FBLN1P23142 703 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 LMOD1P29536 600 aaPredicted RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 INPP5BP32019 993 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 TDO2P48775 406 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 XPCQ01831 940 aaPredicted RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 KCNA1Q09470 495 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 DPYDQ12882 1025 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 HDAC1Q13547 482 aaPredicted RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 SKOR2Q2VWA4 1001 aaPredicted RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 HSP90AB4PQ58FF6 505 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 NOM1Q5C9Z4 860 aaKnown RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 POTEAQ6S8J7 498 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 ACAD11Q709F0 780 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 KRT28Q7Z3Y7 464 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 DZIP1LQ8IYY4 767 aaKnown RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 OTUD6BQ8N6M0 293 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 ORAI2Q96SN7 254 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 LACRTQ9GZZ8 138 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 RBSNQ9H1K0 784 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 PRDM16Q9HAZ2 1276 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 TFIP11Q9UBB9 837 aaKnown RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 POLKQ9UBT6 870 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 DMGDHQ9UI17 866 aaKnown RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 TRIM33Q9UPN9 1127 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 RTCBQ9Y3I0 505 aaKnown RBP3.15□□□□□ -1.91
TRAV41-201ENST00000390468 TOGARAM1Q9Y4F4 1720 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 KIF16BQ96L93 1317 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 ANKRD36CQ5JPF3 1778 aa3.15□□□□□ -1.91
TRAV41-201ENST00000390468 NUP98P52948 1817 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 BRWD3Q6RI45 1802 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 LOC102724428A0A0B4J2F2 783 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 LINC01387J3KSC0 135 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 DHX15O43143 795 aaKnown RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 DKK1O94907 266 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 WISP1O95388 367 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 HMOX1P09601 288 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 HOXC9P31274 260 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 PRKAR2BP31323 418 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 IL13P35225 146 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 RBM25P49756 843 aaKnown RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 NRLP54845 237 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 SIK1P57059 783 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 CBX1P83916 185 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 TRDNQ13061 729 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 CRTC2Q53ET0 693 aaPredicted RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 ILDR2Q71H61 639 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 CCDC91Q7Z6B0 441 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 STAG2Q8N3U4 1231 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 TCP11L2Q8N4U5 519 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 UTP4Q969X6 686 aaKnown RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 FAM210AQ96ND0 272 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 RASSF4Q9H2L5 321 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 TLR7Q9NYK1 1049 aaKnown RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 MTMR7Q9Y216 660 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 RRP7AQ9Y3A4 280 aaKnown RBP3.14□□□□□ -1.91
TRAV41-201ENST00000390468 ARFGEF2Q9Y6D5 1785 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 PAPPAQ13219 1627 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 USP19O94966 1318 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 MAP3K19Q56UN5 1328 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 TAF1LQ8IZX4 1826 aa3.14□□□□□ -1.91
TRAV41-201ENST00000390468 HMX2A2RU54 273 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 MPHOSPH10O00566 681 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 GSC2O15499 205 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 MMP20O60882 483 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 ADAMTS4O75173 837 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 NEFHP12036 1026 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 IGFBP4P22692 258 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 GRIK1P39086 918 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 TMPOP42166 694 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 NASPP49321 788 aaPredicted RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 EIF4A2Q14240 407 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SETDB1Q15047 1291 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 CCDC27Q2M243 656 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 HSP90AB2PQ58FF8 381 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 LRCH2Q5VUJ6 765 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms