RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 PRDM4Q9UKN5 801 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 UTYO14607 1347 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 MYH3P11055 1940 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 ZBTB7AO95365 584 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 SERPINB2P05120 415 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 NBPF7P0C2Y1 421 aaPredicted RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 DAB2P98082 770 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 ORC1Q13415 861 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 ENOX2Q16206 610 aaKnown RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 TREML1Q86YW5 311 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 GPR152Q8TDT2 470 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 JARID2Q92833 1246 aaPredicted RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 FAM89AQ96GI7 184 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 GTPBP4Q9BZE4 634 aaKnown RBP8.98□□□□□ -0.97
TRBV28-201ENST00000390400 ZBTB40Q9NUA8 1239 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
TRBV28-201ENST00000390400 LAMB2P55268 1798 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 PNMA6FA0A0J9YX94 578 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
TRBV28-201ENST00000390400 OPLAHO14841 1288 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 GNAI2P04899 355 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 POLD1P28340 1107 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 CASP7P55210 303 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 ST5P78524 1137 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 RAD51AP2Q09MP3 1159 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 IFFO2Q5TF58 517 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 KIAA1211Q6ZU35 1233 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 ZNF280CQ8ND82 737 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 HPS1Q92902 700 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 NIFKQ9BYG3 293 aaKnown RBP8.97□□□□□ -0.97
TRBV28-201ENST00000390400 RWDD1Q9H446 243 aaPredicted RBP8.97□□□□□ -0.97
TRBV28-201ENST00000390400 DMGDHQ9UI17 866 aaKnown RBP8.97□□□□□ -0.97
TRBV28-201ENST00000390400 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 LRRFIP2Q9Y608 721 aaKnown RBP8.97□□□□□ -0.97
TRBV28-201ENST00000390400 ABCC12Q96J65 1359 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
TRBV28-201ENST00000390400 TNFRSF10AO00220 468 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 PLA2G4AP47712 749 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 ZNF445P59923 1031 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 HMGN5P82970 282 aaKnown RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 PRR5LQ6MZQ0 368 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 SYNE4Q8N205 404 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 MEIOBQ8N635 442 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 PLA2G12BQ9BX93 195 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 NOL7Q9UMY1 257 aaKnown RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 CHMP3Q9Y3E7 222 aa8.96□□□□□ -0.98
TRBV28-201ENST00000390400 DDX60Q8IY21 1712 aaKnown RBP8.96□□□□□ -0.98
TRBV28-201ENST00000390400 PDE8AO60658 829 aa8.95□□□□□ -0.98
TRBV28-201ENST00000390400 FAM193AP78312 1265 aa8.95□□□□□ -0.98
TRBV28-201ENST00000390400 KLHL40Q2TBA0 621 aa8.95□□□□□ -0.98
TRBV28-201ENST00000390400 SLC10A5Q5PT55 438 aa8.95□□□□□ -0.98
TRBV28-201ENST00000390400 TMEM214Q6NUQ4 689 aaKnown RBP8.95□□□□□ -0.98
TRBV28-201ENST00000390400 BICC1Q9H694 974 aaKnown RBP8.95□□□□□ -0.98
TRBV28-201ENST00000390400 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
TRBV28-201ENST00000390400 LETM1O95202 739 aaPredicted RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 GRNP28799 593 aaKnown RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 CTSOP43234 321 aaPredicted RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 PHKA2P46019 1235 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 CTSWP56202 376 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 FOXO4P98177 505 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 RAB3GAP1Q15042 981 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 C1orf53Q5VUE5 145 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 ANKRD44Q8N8A2 993 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 KAZALD1Q96I82 304 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 PDLIM2Q96JY6 352 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 BRIP1Q9BX63 1249 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 SLKQ9H2G2 1235 aaPredicted RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 SPON1Q9HCB6 807 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
TRBV28-201ENST00000390400 ANKRD31Q8N7Z5 1873 aa8.94□□□□□ -0.98
TRBV28-201ENST00000390400 HMMRO75330 724 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 MICAL2O94851 1124 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 CTSHP09668 335 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 RGS3P49796 1198 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 RNF144AP50876 292 aaPredicted RBP8.93□□□□□ -0.98
TRBV28-201ENST00000390400 CCDC152Q4G0S7 254 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 EPHA10Q5JZY3 1008 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 CEP85Q6P2H3 762 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 LMBR1LQ6UX01 489 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 CREBRFQ8IUR6 639 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 C10orf71Q711Q0 1435 aa8.93□□□□□ -0.98
TRBV28-201ENST00000390400 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
TRBV28-201ENST00000390400 SRGAP3O43295 1099 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 CSF1RP07333 972 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 GTF2F1P35269 517 aaKnown RBP eCLIP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms