RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CBFA2T2O43439 604 aa20.14■□□□□ 0.81
SQSTM1-202ENST00000389805 LIFRP42702 1097 aa20.14■□□□□ 0.81
SQSTM1-202ENST00000389805 INTS13Q9NVM9 706 aa20.14■□□□□ 0.81
SQSTM1-202ENST00000389805 A0A0U1RQJ8 604 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 PACS2Q86VP3 889 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 NUP133Q8WUM0 1156 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 ATRIPQ8WXE1 791 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 KIFC2Q96AC6 838 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 IKBKBO14920 756 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 DHX8Q14562 1220 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-202ENST00000389805 CMA1P23946 247 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 KLRK1P26718 216 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 SYKP43405 635 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 DYNLL1P63167 89 aaKnown RBP20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 PTPAQ15257 358 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 PLCH1Q4KWH8 1693 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 CCDC151A5D8V7 595 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 TRIM29Q14134 588 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 WTAPQ15007 396 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 ICE2Q659A1 982 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 ANKRD18AQ8IVF6 992 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 GOLGA6L1Q8N7Z2 621 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 PNKPQ96T60 521 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 KRT23Q9C075 422 aa20.12■□□□□ 0.81
SQSTM1-202ENST00000389805 MAP2K7O14733 419 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 RHOXF2BP0C7M4 288 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 EVX2Q03828 476 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 STAG1Q8WVM7 1258 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 DRC1Q96MC2 740 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 RHOXF2Q9BQY4 288 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 MRPL44Q9H9J2 332 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 PSD3Q9NYI0 1048 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 PPARAQ07869 468 aa20.11■□□□□ 0.81
SQSTM1-202ENST00000389805 PNPLA7Q6ZV29 1317 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 PRDM1O75626 825 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 FAM182BQ5T319 152 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 MINPP1Q9UNW1 487 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 PDE4BQ07343 736 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 BEND6Q5SZJ8 279 aaPredicted RBP20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 JAKMIP3Q5VZ66 844 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 ANKZF1Q9H8Y5 726 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 ABCB6Q9NP58 842 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 ZNF652Q9Y2D9 606 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 hCG_1642624A0A1W2PR95 340 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 EIF3CLB5ME19 914 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 RTN1Q16799 776 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 TTC31Q49AM3 519 aaPredicted RBP20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 ZNF384Q8TF68 577 aa20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 EIF3CQ99613 913 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 SRP68Q9UHB9 627 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-202ENST00000389805 MAGEB6P1A0A0J9YX57 407 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 GNAT2P19087 354 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 ATP2B1P20020 1258 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 TC2NQ8N9U0 490 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 FOXN1O15353 648 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 IFNAR1P17181 557 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 GRIN1Q05586 938 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 NR5A1Q13285 461 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 FCHSD1Q86WN1 690 aa20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
SQSTM1-202ENST00000389805 LOC102724159A0A0B4J2E5 919 aa20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 PWP2Q15269 919 aaKnown RBP20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 TRMT44Q8IYL2 757 aaKnown RBP20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 CPLX3Q8WVH0 158 aa20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 JRKLQ9Y4A0 524 aa20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 COL1A1P02452 1464 aaPredicted RBP20.08■□□□□ 0.81
SQSTM1-202ENST00000389805 SOWAHDA6NJG2 315 aa20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 TOB1P50616 345 aaPredicted RBP20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 BRD3Q15059 726 aa20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 HDXQ7Z353 690 aa20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 SLC51AQ86UW1 340 aa20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 FOXP4Q8IVH2 680 aaPredicted RBP20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 DIS3L2Q8IYB7 885 aaKnown RBP20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 RGS22Q8NE09 1264 aa20.08■□□□□ 0.8
SQSTM1-202ENST00000389805 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 ERICH2A1L162 156 aa20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 IVLP07476 585 aa20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 SART3Q15020 963 aaKnown RBP20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 OXER1Q8TDS5 423 aa20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 RTL9Q8NET4 1388 aa20.07■□□□□ 0.8
SQSTM1-202ENST00000389805 COL22A1Q8NFW1 1626 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms