RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 HAUS3Q68CZ6 603 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 LRWD1Q9UFC0 647 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 CLTAP09496 248 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
FANCA-202ENST00000389301 DZIP3Q86Y13 1208 aaKnown RBP13.86□□□□□ -0.19
FANCA-202ENST00000389301 KBTBD3Q8NAB2 608 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 TBC1D31Q96DN5 1066 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
FANCA-202ENST00000389301 CCT6BQ92526 530 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
FANCA-202ENST00000389301 FAM170AA1A519 330 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 E7EWF7 191 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 KCNK3O14649 394 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 MYO1AQ9UBC5 1043 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
FANCA-202ENST00000389301 MORC3Q14149 939 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 CABP7Q86V35 215 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 RABGGTAQ92696 567 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 NUCKS1Q9H1E3 243 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 COL17A1Q9UMD9 1497 aaPredicted RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 BUB1O43683 1085 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 PRDM1O75626 825 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 AP1ARQ63HQ0 302 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 CERS3Q8IU89 383 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 RILPQ96NA2 401 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 SP4Q02446 784 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 PHLDB3Q6NSJ2 640 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 IQCDQ96DY2 449 aa13.85□□□□□ -0.19
FANCA-202ENST00000389301 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 TPX2Q9ULW0 747 aaKnown RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 BLMP54132 1417 aaPredicted RBP13.85□□□□□ -0.19
FANCA-202ENST00000389301 KRIT1O00522 736 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 TMCO4Q5TGY1 634 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 HOMER3Q9NSC5 361 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 NPATQ14207 1427 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 SESN3P58005 492 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 MAP7Q14244 749 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
FANCA-202ENST00000389301 GAS8O95995 478 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 CDC25BP30305 580 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 TTC6Q86TZ1 520 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 PFDN4Q9NQP4 134 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 TACC3Q9Y6A5 838 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 UGGT2Q9NYU1 1516 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 NCAPH2Q6IBW4 605 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 DPH5Q9H2P9 285 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 USP19O94966 1318 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 hCG_1642624A0A1W2PR95 340 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 OPHN1O60890 802 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 NONOQ15233 471 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 13.2
FANCA-202ENST00000389301 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 KCTD16Q68DU8 428 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 SRGAP1Q7Z6B7 1085 aa13.84□□□□□ -0.19
FANCA-202ENST00000389301 PTH1RQ03431 593 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 SUCLG2Q96I99 432 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 HAUS4Q9H6D7 363 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 ABCC1P33527 1531 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 BACH1O14867 736 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 CCDC13Q8IYE1 715 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 SIRT1Q96EB6 747 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 PTPROQ16827 1216 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 EFCAB13Q8IY85 973 aa13.83□□□□□ -0.2
FANCA-202ENST00000389301 ZNF594Q96JF6 807 aaPredicted RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 RPSAP08865 295 aaKnown RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 RNF168Q8IYW5 571 aaPredicted RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
FANCA-202ENST00000389301 PLCH2O75038 1416 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 BAG2O95816 211 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
FANCA-202ENST00000389301 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 TDRD7Q8NHU6 1098 aaKnown RBP13.82□□□□□ -0.2
FANCA-202ENST00000389301 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 FAN1Q9Y2M0 1017 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 RGS12O14924 1447 aa13.82□□□□□ -0.2
FANCA-202ENST00000389301 LUC7L3O95232 432 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms