RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ZEB2O60315 1214 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 GMNNO75496 209 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 ERCC3P19447 782 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 XDHP47989 1333 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 CAPN9O14815 690 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
LRRK1-201ENST00000388948 CHRNDQ07001 517 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 GIMAP7Q8NHV1 300 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
LRRK1-201ENST00000388948 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 PRR16Q569H4 304 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 CLSTN2Q9H4D0 955 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 PPP2R5BQ15173 497 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 SDR42E1Q8WUS8 393 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 XKR9Q5GH70 373 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 TRIM7Q9C029 511 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ASIC2Q16515 512 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 NELFCDQ8IXH7 590 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
LRRK1-201ENST00000388948 LIG4P49917 911 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 TSGA10Q9BZW7 698 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 VPS16Q9H269 839 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 APOL6Q9BWW8 343 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 TLDC2A0PJX2 215 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 TYRO3Q06418 890 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ZWINTO95229 277 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 YWHAEP62258 255 aaKnown RBP16.53■□□□□ 0.24
LRRK1-201ENST00000388948 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ZBTB40Q9NUA8 1239 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 PNMA2Q9UL42 364 aa16.53■□□□□ 0.24
LRRK1-201ENST00000388948 ATF7P17544 494 aaPredicted RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 CUL4BQ13620 913 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 PRPF31Q8WWY3 499 aaKnown RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 BCRP11274 1271 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 IFNKQ9P0W0 207 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 VPS54Q9P1Q0 977 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 TMEM232C9JQI7 657 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 KCNK9Q9NPC2 374 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 ANO1Q5XXA6 986 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 GPR161Q8N6U8 529 aaKnown RBP16.52■□□□□ 0.24
LRRK1-201ENST00000388948 ANAPC4Q9UJX5 808 aa16.52■□□□□ 0.24
LRRK1-201ENST00000388948 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.23
LRRK1-201ENST00000388948 TTC14Q96N46 770 aa16.52■□□□□ 0.23
LRRK1-201ENST00000388948 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.23
LRRK1-201ENST00000388948 RNASELQ05823 741 aaKnown RBP16.52■□□□□ 0.23
LRRK1-201ENST00000388948 TIGD1Q96MW7 591 aa16.52■□□□□ 0.23
LRRK1-201ENST00000388948 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 STK25O00506 426 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 RLBP1P12271 317 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 CABP7Q86V35 215 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 KIAA1841Q6NSI8 718 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
LRRK1-201ENST00000388948 POLA2Q14181 598 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 CASC4Q6P4E1 433 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 CHL1O00533 1208 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 CCDC186Q7Z3E2 898 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 KCNJ14Q9UNX9 436 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 FMNL1O95466 1100 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-201ENST00000388948 TNNC2P02585 160 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 CNGA4Q8IV77 575 aa16.51■□□□□ 0.23
LRRK1-201ENST00000388948 AKT3Q9Y243 479 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 NUB1Q9Y5A7 615 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 ITIH3Q06033 890 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 ZNF569Q5MCW4 686 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 C4orf50Q6ZRC1 276 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 TNNC1P63316 161 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
LRRK1-201ENST00000388948 MRRFQ96E11 262 aaKnown RBP16.5■□□□□ 0.23
LRRK1-201ENST00000388948 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 TPD52P55327 224 aaPredicted RBP16.5■□□□□ 0.23
LRRK1-201ENST00000388948 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
LRRK1-201ENST00000388948 NT5C3AQ9H0P0 336 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 NRBP2Q9NSY0 501 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 PAXBP1Q9Y5B6 917 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 CCDC122Q5T0U0 273 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms