RNA–Protein interactions for RNA: ENST00000384782.1

RNU1-3-201, Transcript of RNA, U1 small nuclear 3, humanhuman

BASIC

Gene RNU1-3, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-3-201ENST00000384782 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
RNU1-3-201ENST00000384782 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
RNU1-3-201ENST00000384782 IGKV6D-41A0A0C4DH26 115 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 TTLL1O95922 423 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 EPS15P42566 896 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 TRIM22Q8IYM9 498 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 NSUN7Q8NE18 718 aaKnown RBP10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 WASF1Q92558 559 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 DCPSQ96C86 337 aaKnown RBP10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 LZTS2Q9BRK4 669 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 DEFB129Q9H1M3 183 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 STX8Q9UNK0 236 aa10.32□□□□□ -0.76
RNU1-3-201ENST00000384782 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 EGFRP00533 1210 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 AKR1B1P15121 316 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 IFNAR1P17181 557 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 SSRP1Q08945 709 aaKnown RBP10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 ST3GAL1Q11201 340 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 TROAPQ12815 778 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 SUPT20HL1Q3ZLR7 823 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 ANGEL2Q5VTE6 544 aaKnown RBP10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 PNMA8AQ86V59 439 aaPredicted RBP10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 TMEM47Q9BQJ4 181 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 STK36Q9NRP7 1315 aa10.31□□□□□ -0.76
RNU1-3-201ENST00000384782 STX6O43752 255 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 NMT2O60551 498 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 EPHX2P34913 555 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 MKL1Q969V6 931 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 TEPSINQ96N21 525 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 ORC3Q9UBD5 711 aaPredicted RBP10.3□□□□□ -0.76
RNU1-3-201ENST00000384782 H3BQV1 296 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 CTNND1O60716 968 aaKnown RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 CTDNEP1O95476 244 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 ASNSP08243 561 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 XBP1P17861 261 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 SYT1P21579 422 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 CDC27P30260 824 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 CAP2P40123 477 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 GRM4Q14833 912 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 MYL10Q9BUA6 226 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 ZNF341Q9BYN7 854 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
RNU1-3-201ENST00000384782 DEXIO95424 95 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 BRD1O95696 1058 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 GH2P01242 217 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 RXRAP19793 462 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 NF2P35240 595 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 ICA1Q05084 483 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 TRIM29Q14134 588 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 NTRK3Q16288 839 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
RNU1-3-201ENST00000384782 PALM3A6NDB9 673 aaPredicted RBP10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 JAK2O60674 1132 aa10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 EEF2P13639 858 aaKnown RBP10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 PTMSP20962 102 aa10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
RNU1-3-201ENST00000384782 SEPT2Q15019 361 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms