RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 GABPAQ06546 454 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 TBC1D10BQ4KMP7 808 aaPredicted RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 TMTC2Q8N394 836 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 CRACR2BQ8N4Y2 399 aaPredicted RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 ZMYND15Q9H091 742 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 ZBTB43O43298 467 aa14.46□□□□□ -0.09
CIITA-202ENST00000381835 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
CIITA-202ENST00000381835 PTMAP06454 111 aaKnown RBP14.46□□□□□ -0.09
CIITA-202ENST00000381835 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.09
CIITA-202ENST00000381835 C9orf131Q5VYM1 1079 aa14.46□□□□□ -0.09
CIITA-202ENST00000381835 SYNE3Q6ZMZ3 975 aa14.46□□□□□ -0.09
CIITA-202ENST00000381835 ZBED3Q96IU2 234 aaPredicted RBP14.46□□□□□ -0.09
CIITA-202ENST00000381835 PI4KBQ9UBF8 816 aa14.46□□□□□ -0.09
CIITA-202ENST00000381835 SCAF8Q9UPN6 1271 aaKnown RBP14.46□□□□□ -0.09
CIITA-202ENST00000381835 FAM196BA6NMK8 535 aa14.46□□□□□ -0.1
CIITA-202ENST00000381835 JAK2O60674 1132 aa14.46□□□□□ -0.1
CIITA-202ENST00000381835 GPC2Q8N158 579 aa14.46□□□□□ -0.1
CIITA-202ENST00000381835 SIPA1L1O43166 1804 aa14.46□□□□□ -0.1
CIITA-202ENST00000381835 WDR33Q9C0J8 1336 aaKnown RBP14.45□□□□□ -0.1
CIITA-202ENST00000381835 UQCRHLA0A096LP55 91 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 H7C1D1 291 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 SOCS7O14512 581 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 UQCRHP07919 91 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 MMP14P50281 582 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 NUP133Q8WUM0 1156 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 DDX11Q96FC9 970 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 CSRNP1Q96S65 589 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 TRIM34Q9BYJ4 488 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 IL17RBQ9NRM6 502 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 SWAP70Q9UH65 585 aa14.45□□□□□ -0.1
CIITA-202ENST00000381835 CPLX1O14810 134 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 DDNO94850 711 aaPredicted RBP14.44□□□□□ -0.1
CIITA-202ENST00000381835 CTDNEP1O95476 244 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 EHD4Q9H223 541 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 GDPD2Q9HCC8 539 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 GOLGA8AA7E2F4 631 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
CIITA-202ENST00000381835 SHMT1P34896 483 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 ADD1P35611 737 aaKnown RBP14.44□□□□□ -0.1
CIITA-202ENST00000381835 NT5C2P49902 561 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 USP48Q86UV5 1035 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 NSUN7Q8NE18 718 aaKnown RBP14.44□□□□□ -0.1
CIITA-202ENST00000381835 FAM151AQ8WW52 585 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 DNAJC18Q9H819 358 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 GPRC5DQ9NZD1 345 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 STX8Q9UNK0 236 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
CIITA-202ENST00000381835 DHX16O60231 1041 aaKnown RBP14.43□□□□□ -0.1
CIITA-202ENST00000381835 CDC27P30260 824 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 NEDD1Q8NHV4 660 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 LLPHQ9BRT6 129 aaKnown RBP14.43□□□□□ -0.1
CIITA-202ENST00000381835 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 ASTN2O75129 1339 aaPredicted RBP14.43□□□□□ -0.1
CIITA-202ENST00000381835 ATRNL1Q5VV63 1379 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 PTPDC1A2A3K4 754 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 AKR1B1P15121 316 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 FKBP1CQ5VVH2 108 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 CATIPQ7Z7H3 387 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 FOXP4Q8IVH2 680 aaPredicted RBP14.43□□□□□ -0.1
CIITA-202ENST00000381835 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
CIITA-202ENST00000381835 MPHOSPH10O00566 681 aaKnown RBP14.42□□□□□ -0.1
CIITA-202ENST00000381835 SYT1P21579 422 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 EPS15P42566 896 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 DGKHQ86XP1 1220 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 FAM83AQ86UY5 434 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 FAM184AQ8NB25 1140 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 SMARCC2Q8TAQ2 1214 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 CEP95Q96GE4 821 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 HACL1Q9UJ83 578 aa14.42□□□□□ -0.1
CIITA-202ENST00000381835 RTN1Q16799 776 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 FANCBQ8NB91 859 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 COL2A1P02458 1487 aaPredicted RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 STX6O43752 255 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 GRIN3BO60391 1043 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 TNNI2P48788 182 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 HMGN5P82970 282 aaKnown RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 RASA3Q14644 834 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 CERKLQ49MI3 558 aaPredicted RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 SASS6Q6UVJ0 657 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.41□□□□□ -0.1
CIITA-202ENST00000381835 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
CIITA-202ENST00000381835 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
CIITA-202ENST00000381835 VPS37CA5D8V6 355 aaPredicted RBP14.4□□□□□ -0.1
CIITA-202ENST00000381835 TROAPQ12815 778 aa14.4□□□□□ -0.1
CIITA-202ENST00000381835 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
CIITA-202ENST00000381835 CPLX2Q6PUV4 134 aaKnown RBP14.4□□□□□ -0.1
CIITA-202ENST00000381835 CLEC10AQ8IUN9 316 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms