RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 WTIPA6NIX2 430 aaPredicted RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 ZNF18P17022 549 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 PLCD1P51178 756 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 ETF1P62495 437 aaKnown RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 FMR1Q06787 632 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 CTR9Q6PD62 1173 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 FERMT2Q96AC1 680 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 OGFRQ9NZT2 677 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 V9GY48 417 aaPredicted RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 PRDM1O75626 825 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 TROAPQ12815 778 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 TBX2Q13207 712 aaPredicted RBP13.61□□□□□ -0.23
TRIM23-203ENST00000381018 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 TMTC3Q6ZXV5 915 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 USP49Q70CQ1 688 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 ZNF384Q8TF68 577 aa13.61□□□□□ -0.23
TRIM23-203ENST00000381018 PDS5AQ29RF7 1337 aaKnown RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 hCG_1642624A0A1W2PR95 340 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 USP17L21D6R901 530 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 RGL2O15211 777 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 ZSCAN12O43309 604 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 ORC4O43929 436 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 ELF2Q15723 593 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 SPECC1LQ69YQ0 1117 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 FBXO33Q7Z6M2 555 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 DHX58Q96C10 678 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 NSUN4Q96CB9 384 aaKnown RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 V9GYY5 206 aaPredicted RBP13.6□□□□□ -0.23
TRIM23-203ENST00000381018 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
TRIM23-203ENST00000381018 KCNQ2O43526 872 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 SLFN14P0C7P3 912 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 MECOMQ03112 1051 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 CCDC93Q567U6 631 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 TMEM139Q8IV31 216 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 A0A087X0B3 334 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 GOLGA8FQ08AF8 430 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 GOLGA8DPQ0D2H9 430 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 BICDL1Q6ZP65 573 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 SYMPKQ92797 1274 aaKnown RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 TNFRSF25Q93038 417 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 EPSTI1Q96J88 318 aa13.59□□□□□ -0.23
TRIM23-203ENST00000381018 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM23-203ENST00000381018 STX10O60499 249 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 SH3RF1Q7Z6J0 888 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 NYXQ9GZU5 481 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 SAMSN1Q9NSI8 373 aaKnown RBP13.58□□□□□ -0.24
TRIM23-203ENST00000381018 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
TRIM23-203ENST00000381018 DNAI1Q9UI46 699 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
TRIM23-203ENST00000381018 GOLGA6L9A6NEM1 432 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 KLRK1P26718 216 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 HIBADHP31937 336 aaKnown RBP13.57□□□□□ -0.24
TRIM23-203ENST00000381018 AFMP43652 599 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
TRIM23-203ENST00000381018 NPY5RQ15761 445 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 TMED8Q6PL24 325 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-203ENST00000381018 REXO1L1PQ8IX06 675 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 TC2NQ8N9U0 490 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 PAGE5Q96GU1 130 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 MED15Q96RN5 788 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-203ENST00000381018 PPP2R2CQ9Y2T4 447 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
TRIM23-203ENST00000381018 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-203ENST00000381018 ATP2C1P98194 919 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms