RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 PTPREP23469 700 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 TEX35Q5T0J7 233 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 SPECC1LQ69YQ0 1117 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 KLHL10Q6JEL2 608 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 MRPL44Q9H9J2 332 aaKnown RBP18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 A0A087X0B3 334 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 ZBTB22O15209 634 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 TEX33O43247 280 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 ZSCAN12O43309 604 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 IFNAR1P17181 557 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 STX17P56962 302 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 SMARCE1Q969G3 411 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 CSRNP2Q9H175 543 aa18.55■□□□□ 0.56
NKX3-1-201ENST00000380871 SOWAHDA6NJG2 315 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 USP17L12C9JPN9 530 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 USP17L21D6R901 530 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 PRDX5P30044 214 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 CASQ1P31415 396 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 LIFRP42702 1097 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 CABP5Q9NP86 173 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 COL16A1Q07092 1604 aaPredicted RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 MYH14Q7Z406 1995 aaKnown RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 DHX8Q14562 1220 aaKnown RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 TRIM22Q8IYM9 498 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 CPLX3Q8WVH0 158 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 CCDC34Q96HJ3 373 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 ZCCHC17Q9NP64 241 aaKnown RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 AFMP43652 599 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 MORC3Q14149 939 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 EARS2Q5JPH6 523 aaKnown RBP18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 DHX58Q96C10 678 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 USP21Q9UK80 565 aa18.54■□□□□ 0.56
NKX3-1-201ENST00000380871 EFCAB8A8MWE9 144 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 WNT7AO00755 349 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 ACTN4O43707 911 aaKnown RBP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 NMT2O60551 498 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 CYP2D6P10635 497 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 SAFBQ15424 915 aaKnown RBP eCLIP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 BARGINQ6ZT62 677 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 KIFC2Q96AC6 838 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 SARSP49591 514 aaKnown RBP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 AKAP17AQ02040 695 aaKnown RBP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 ALX1Q15699 326 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 EPSTI1Q96J88 318 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 LZTFL1Q9NQ48 299 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 BSDC1Q9NW68 430 aaPredicted RBP18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 TNKSO95271 1327 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
NKX3-1-201ENST00000380871 TUBB4AP04350 444 aa18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 PPP2R3AQ06190 1150 aa18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 TFRCP02786 760 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 MAP3K9P80192 1104 aa18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 ARHGEF1Q92888 912 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-201ENST00000380871 GNAT2P19087 354 aa18.52■□□□□ 0.55
NKX3-1-201ENST00000380871 FCHSD1Q86WN1 690 aa18.52■□□□□ 0.55
NKX3-1-201ENST00000380871 ARGLU1Q9NWB6 273 aaPredicted RBP18.52■□□□□ 0.55
NKX3-1-201ENST00000380871 MRFAP1Q9Y605 127 aa18.52■□□□□ 0.55
NKX3-1-201ENST00000380871 TAF1P21675 1872 aa18.52■□□□□ 0.55
NKX3-1-201ENST00000380871 COL4A1P02462 1669 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 STX10O60499 249 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 NT5DC1Q5TFE4 455 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 ENOX1Q8TC92 643 aaKnown RBP18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 STAMQ92783 540 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 VPS54Q9P1Q0 977 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 TBC1D8O95759 1140 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 RFC4P35249 363 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 ESR2Q92731 530 aa18.51■□□□□ 0.55
NKX3-1-201ENST00000380871 MECOMQ03112 1051 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 MLKLQ8NB16 471 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 RNF41Q9H4P4 317 aaPredicted RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 RILPL1Q5EBL4 403 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 ZNF384Q8TF68 577 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 CCDC12Q8WUD4 166 aaPredicted RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 STAG1Q8WVM7 1258 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 SRRTQ9BXP5 876 aaKnown RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 BAZ2BQ9UIF8 2168 aaKnown RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 NR1I3Q14994 352 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 SF3B3Q15393 1217 aaKnown RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 CC2D1AQ6P1N0 951 aaPredicted RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 RAD9BQ6WBX8 426 aa18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 FOXP1Q9H334 677 aaPredicted RBP18.5■□□□□ 0.55
NKX3-1-201ENST00000380871 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms