RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ATRNL1Q5VV63 1379 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 LIG1P18858 919 aa9.02□□□□□ -0.96
CDKL5-202ENST00000379996 PSMA5P28066 241 aa9.02□□□□□ -0.96
CDKL5-202ENST00000379996 ANKRD1Q15327 319 aa9.02□□□□□ -0.96
CDKL5-202ENST00000379996 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.96
CDKL5-202ENST00000379996 AIDAQ96BJ3 306 aa9.02□□□□□ -0.96
CDKL5-202ENST00000379996 FIBPO43427 364 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 CRKP46108 304 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 FOXD4L6Q3SYB3 417 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 FOXD4L3Q6VB84 417 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 ARHGAP27Q6ZUM4 889 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 HDAC9Q9UKV0 1011 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 WDR19Q8NEZ3 1342 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 GSG1L2A8MUP6 293 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 KIF3CO14782 793 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 ADCY5O95622 1261 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 LCORLQ8N3X6 602 aa9.02□□□□□ -0.97
CDKL5-202ENST00000379996 SEC62Q99442 399 aaKnown RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 CRNKL1Q9BZJ0 848 aaKnown RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
CDKL5-202ENST00000379996 ZNF541Q9H0D2 1346 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 MBD4O95243 580 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 BLOC1S2Q6QNY1 142 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 LEO1Q8WVC0 666 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 MTA3Q9BTC8 594 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 PFKFB2O60825 505 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 BTDP43251 543 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 SCRN1Q12765 414 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 CCDC129Q6ZRS4 1044 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 METTL16Q86W50 562 aaKnown RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 ARPP21Q9UBL0 812 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 JAK2O60674 1132 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 USP17L8P0C7I0 530 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 KRT32Q14532 448 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 RNF20Q5VTR2 975 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 PLA2G4DQ86XP0 818 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 TCEANC2Q96MN5 208 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 NOL10Q9BSC4 688 aaKnown RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 EPB41L4AQ9HCS5 686 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-202ENST00000379996 MTMR7Q9Y216 660 aa9.01□□□□□ -0.97
CDKL5-202ENST00000379996 BAZ2AQ9UIF9 1905 aaKnown RBP9□□□□□ -0.97
CDKL5-202ENST00000379996 PITPNM2Q9BZ72 1349 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 ENTPD3O75355 529 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 IRX5P78411 483 aaPredicted RBP9□□□□□ -0.97
CDKL5-202ENST00000379996 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 NSUN7Q8NE18 718 aaKnown RBP9□□□□□ -0.97
CDKL5-202ENST00000379996 NACAP1Q9BZK3 213 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 FAM173BQ6P4H8 233 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 EHD4Q9H223 541 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 CLSTN2Q9H4D0 955 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 OCEL1Q9H607 264 aa9□□□□□ -0.97
CDKL5-202ENST00000379996 IRF5Q13568 498 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SLFNL1Q499Z3 407 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SASS6Q6UVJ0 657 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 KIAA1524Q8TCG1 905 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 LLPHQ9BRT6 129 aaKnown RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 ARMT1Q9H993 441 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 DCP1AQ9NPI6 582 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 GPRC5DQ9NZD1 345 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 MYH8P13535 1937 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SNW1Q13573 536 aaKnown RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 DIXDC1Q155Q3 683 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 C9orf131Q5VYM1 1079 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 LARP1BQ659C4 914 aaKnown RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 FAM83AQ86UY5 434 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SH3RF3Q8TEJ3 882 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 STAG1Q8WVM7 1258 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 NEK1Q96PY6 1258 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SLC4A4Q9Y6R1 1079 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 WDHD1O75717 1129 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 RAD17O75943 681 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 FGAP02671 866 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 PDCP20941 246 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 SCNN1DP51172 638 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 KRT85P78386 507 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 CDC42EP5Q6NZY7 148 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 Q6ZUG5 572 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 MXD3Q9BW11 206 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 MYOZ2Q9NPC6 264 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 AATFQ9NY61 560 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDKL5-202ENST00000379996 PGAP2Q9UHJ9 254 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 PPP2R3BQ9Y5P8 575 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
CDKL5-202ENST00000379996 FLT1P17948 1338 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 HMGB1P09429 215 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 DYNLL1P63167 89 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 MAP3K10Q02779 954 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 CFAP100Q494V2 611 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 ENGASEQ8NFI3 743 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 MYRIPQ8NFW9 859 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms