RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FOXO4P98177 505 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 CKAP4Q07065 602 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 PDIA6Q15084 440 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 RESP18Q5W5W9 173 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 IQUBQ8NA54 791 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 ENC1O14682 589 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 SHC4Q6S5L8 630 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 SLC35F6Q8N357 371 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 GNAT2P19087 354 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 KRT9P35527 623 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
SMAD9-202ENST00000379826 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
SMAD9-202ENST00000379826 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 ASIC1P78348 528 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 SPAG1Q07617 926 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 MB21D2Q8IYB1 491 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-202ENST00000379826 AFAP1L1Q8TED9 768 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 ERBB3P21860 1342 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-202ENST00000379826 SCARF1Q14162 830 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 WDR24Q96S15 920 aa12.82□□□□□ -0.36
SMAD9-202ENST00000379826 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
SMAD9-202ENST00000379826 KRT86O43790 486 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 CIAO1O76071 339 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 GTF2A1P52655 376 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-202ENST00000379826 ZNF654Q8IZM8 581 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 EEF2KMTQ96G04 330 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 SEPT11Q9NVA2 429 aaKnown RBP12.81□□□□□ -0.36
SMAD9-202ENST00000379826 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 BMP15O95972 392 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 MCAMP43121 646 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 TTC31Q49AM3 519 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-202ENST00000379826 ENGASEQ8NFI3 743 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 AKR1B10O60218 316 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 HSF2BPO75031 334 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 ADD2P35612 726 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 CTSWP56202 376 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 MAATS1Q7Z4T9 603 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 TAF4BQ92750 862 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 MMRN2Q9H8L6 949 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 H7C1W4 665 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 PSMA7O14818 248 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 ZMYND10O75800 440 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 PPARAQ07869 468 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 MORC3Q14149 939 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 MTF1Q14872 753 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 BRD3Q15059 726 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 FAM47AQ5JRC9 791 aa12.81□□□□□ -0.36
SMAD9-202ENST00000379826 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
SMAD9-202ENST00000379826 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 KIF5BP33176 963 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 KRT83P78385 493 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 ARID5AQ03989 594 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 EPSTI1Q96J88 318 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 SLFN14P0C7P3 912 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 BCAMP50895 628 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 PDE4BQ07343 736 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 FCHSD1Q86WN1 690 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 SRGAP1Q7Z6B7 1085 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 MMP1P03956 469 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 TMTC1Q8IUR5 882 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 RABGGTAQ92696 567 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 DENND2AQ9ULE3 1009 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 STX8Q9UNK0 236 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 TSG101Q99816 390 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms