RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMEM179Q6ZVK1 233 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 SLC44A5Q8NCS7 719 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 DYNLL2Q96FJ2 89 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 C12orf42Q96LP6 360 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 KIAA1683Q9H0B3 1180 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 STAP2Q9UGK3 403 aa20.17■□□□□ 0.82
HMGN4-201ENST00000377575 CYP2D7A0A087X1C5 515 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 TNPO2O14787 897 aaKnown RBP20.16■□□□□ 0.82
HMGN4-201ENST00000377575 PDE1AP54750 535 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 SEPT2Q15019 361 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 ZYXQ15942 572 aaKnown RBP20.16■□□□□ 0.82
HMGN4-201ENST00000377575 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 GTF3C2Q8WUA4 911 aaPredicted RBP20.16■□□□□ 0.82
HMGN4-201ENST00000377575 ZNF333Q96JL9 665 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 CCDC17Q96LX7 622 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 EMILIN3Q9NT22 766 aa20.16■□□□□ 0.82
HMGN4-201ENST00000377575 GSG1L2A8MUP6 293 aa20.15■□□□□ 0.82
HMGN4-201ENST00000377575 M0R2C6 588 aa20.15■□□□□ 0.82
HMGN4-201ENST00000377575 GUCY1A2P33402 732 aa20.15■□□□□ 0.82
HMGN4-201ENST00000377575 CDK8P49336 464 aa20.15■□□□□ 0.82
HMGN4-201ENST00000377575 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
HMGN4-201ENST00000377575 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 GREB1LQ9C091 1923 aaPredicted RBP20.14■□□□□ 0.81
HMGN4-201ENST00000377575 ROBO3Q96MS0 1386 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 TDO2P48775 406 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 HERVK_113P62684 666 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 PRKCZQ05513 592 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 SBK1Q52WX2 424 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 ACER1Q8TDN7 264 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 COA7Q96BR5 231 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 EVI5LQ96CN4 794 aa20.14■□□□□ 0.81
HMGN4-201ENST00000377575 KIAA0100Q14667 2235 aaKnown RBP20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L15C9J2P7 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L13C9JLJ4 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L11C9JVI0 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L18D6R9N7 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L22D6RA61 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L17D6RBQ6 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L19D6RCP7 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L20D6RJB6 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 APPP05067 770 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 VCAM1P19320 739 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 ICA1Q05084 483 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 USP17L24Q0WX57 530 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 ZMYM1Q5SVZ6 1142 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 SH3TC2Q8TF17 1288 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 SH2D4AQ9H788 454 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 MORF4L1Q9UBU8 362 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 BRCA2P51587 3418 aa20.13■□□□□ 0.81
HMGN4-201ENST00000377575 AKR1B1P15121 316 aa20.12■□□□□ 0.81
HMGN4-201ENST00000377575 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
HMGN4-201ENST00000377575 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
HMGN4-201ENST00000377575 P2RX7Q99572 595 aaKnown RBP20.12■□□□□ 0.81
HMGN4-201ENST00000377575 TNRC18O15417 2968 aaPredicted RBP20.11■□□□□ 0.81
HMGN4-201ENST00000377575 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
HMGN4-201ENST00000377575 IGHDP01880 384 aa20.11■□□□□ 0.81
HMGN4-201ENST00000377575 GRK4P32298 578 aa20.11■□□□□ 0.81
HMGN4-201ENST00000377575 NUCB1Q02818 461 aa20.11■□□□□ 0.81
HMGN4-201ENST00000377575 SEC62Q99442 399 aaKnown RBP20.11■□□□□ 0.81
HMGN4-201ENST00000377575 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
HMGN4-201ENST00000377575 EPB41L4AQ9HCS5 686 aaPredicted RBP20.11■□□□□ 0.81
HMGN4-201ENST00000377575 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
HMGN4-201ENST00000377575 MINDY4BA8MYZ0 360 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 SMIM22K7EJ46 135 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 FLT3LGP49771 235 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 GPRC5AQ8NFJ5 357 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 RPAP3Q9H6T3 665 aaPredicted RBP20.1■□□□□ 0.81
HMGN4-201ENST00000377575 GABRQQ9UN88 632 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 A0A0G2JMZ2 1700 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 MYH4Q9Y623 1939 aa20.1■□□□□ 0.81
HMGN4-201ENST00000377575 PLXNB2O15031 1838 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 A0A1W2PRG0 241 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 IRF5Q13568 498 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 CATSPERGQ6ZRH7 1159 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 IFNL3Q8IZI9 196 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 LPAR1Q92633 364 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 PAGR1Q9BTK6 254 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 NAPBQ9H115 298 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 KANSL2Q9H9L4 492 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
HMGN4-201ENST00000377575 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 ERVK-9P63128 1117 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 ERVK-24P63145 666 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 UBXN2AP68543 259 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 CLEC10AQ8IUN9 316 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 TXNRD2Q9NNW7 524 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
HMGN4-201ENST00000377575 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
HMGN4-201ENST00000377575 ADCY3O60266 1144 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 MYCP01106 439 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms