RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 GNRH1P01148 92 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 APPP05067 770 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 AKR1B1P15121 316 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 FEZ1Q99689 392 aa17.1■□□□□ 0.33
CLCN6-203ENST00000376490 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 GNAT2P19087 354 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-203ENST00000376490 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-203ENST00000376490 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 GIMAP6Q6P9H5 292 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 KIAA1683Q9H0B3 1180 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 EPB41L4AQ9HCS5 686 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-203ENST00000376490 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-203ENST00000376490 SRRDQ9UH36 339 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
CLCN6-203ENST00000376490 MYH4Q9Y623 1939 aa17.08■□□□□ 0.33
CLCN6-203ENST00000376490 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 PEX10O60683 326 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 HOXD10P28358 340 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 FCGRTP55899 365 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
CLCN6-203ENST00000376490 KIAA0100Q14667 2235 aaKnown RBP17.07■□□□□ 0.32
CLCN6-203ENST00000376490 TDO2P48775 406 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 USP14P54578 494 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 PRMT2P55345 433 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 SH3TC2Q8TF17 1288 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 GABRQQ9UN88 632 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
CLCN6-203ENST00000376490 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
CLCN6-203ENST00000376490 RBBP6Q7Z6E9 1792 aaKnown RBP17.07■□□□□ 0.32
CLCN6-203ENST00000376490 RLFQ13129 1914 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 MYPNQ86TC9 1320 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 HERVK_113P62684 666 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 MLLT1Q03111 559 aaPredicted RBP17.06■□□□□ 0.32
CLCN6-203ENST00000376490 FAM110CQ1W6H9 321 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 POTEEQ6S8J3 1075 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 RBPJLQ9UBG7 517 aa17.06■□□□□ 0.32
CLCN6-203ENST00000376490 PARP14Q460N5 1801 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 TNPO2O14787 897 aaKnown RBP17.05■□□□□ 0.32
CLCN6-203ENST00000376490 VCAM1P19320 739 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 PRKCZQ05513 592 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 Q3C1V9 767 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 RAET1EQ8TD07 263 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 TXNRD2Q9NNW7 524 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
CLCN6-203ENST00000376490 MYCP01106 439 aaPredicted RBP17.04■□□□□ 0.32
CLCN6-203ENST00000376490 RASA1P20936 1047 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
CLCN6-203ENST00000376490 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-203ENST00000376490 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 FOXP2O15409 715 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 EEF2P13639 858 aaKnown RBP17.03■□□□□ 0.32
CLCN6-203ENST00000376490 FLT3LGP49771 235 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 ICA1Q05084 483 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 GPRC5AQ8NFJ5 357 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLCN6-203ENST00000376490 NAPBQ9H115 298 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-203ENST00000376490 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 ARHGEF10LQ9HCE6 1279 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 HELLSQ9NRZ9 838 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 HTTP42858 3142 aa17.03■□□□□ 0.32
CLCN6-203ENST00000376490 ZNFX1Q9P2E3 1918 aaKnown RBP17.03■□□□□ 0.32
CLCN6-203ENST00000376490 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
CLCN6-203ENST00000376490 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
CLCN6-203ENST00000376490 PRDM1O75626 825 aa17.02■□□□□ 0.32
CLCN6-203ENST00000376490 GRK4P32298 578 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms