RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 EFCC1Q9HA90 598 aa13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 HDAC6Q9UBN7 1215 aa13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 HOOK1Q9UJC3 728 aaKnown RBP13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 MMP1P03956 469 aa13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
TM9SF2-201ENST00000376387 ERLIN1O75477 346 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 CUL4BQ13620 913 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 SYNE4Q8N205 404 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 SPATA20Q8TB22 786 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 ZSWIM5Q9P217 1185 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 DACH1Q9UI36 760 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 GLI3P10071 1580 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.32
TM9SF2-201ENST00000376387 TMEM94Q12767 1356 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 ENC1O14682 589 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 IVLP07476 585 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 CTAGE8P0CG41 777 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
TM9SF2-201ENST00000376387 ZMYND10O75800 440 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 SYF2O95926 243 aaKnown RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 ADD2P35612 726 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 CABP4P57796 275 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 WNT7AO00755 349 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 EARS2Q5JPH6 523 aaKnown RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 CDKAL1Q5VV42 579 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 HINFPQ9BQA5 517 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 GSPT2Q8IYD1 628 aaKnown RBP13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 CHP1Q99653 195 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
TM9SF2-201ENST00000376387 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 POTEB2H3BUK9 544 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 RNF40O75150 1001 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 AMPD2Q01433 879 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 CCDC96Q2M329 555 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 FAM71BQ8TC56 605 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 FAM89AQ96GI7 184 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 NAA15Q9BXJ9 866 aaKnown RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 VPS16Q9H269 839 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 KIF1AQ12756 1690 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 MAGEA9P43362 315 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 PAGE5Q96GU1 130 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 MYO6Q9UM54 1294 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 REXO2Q9Y3B8 237 aaKnown RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 DCAF5Q96JK2 942 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
TM9SF2-201ENST00000376387 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
TM9SF2-201ENST00000376387 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 FOXD4Q12950 439 aaPredicted RBP12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 SGMS1Q86VZ5 419 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 EPB41L4AQ9HCS5 686 aaPredicted RBP12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 ABHD10Q9NUJ1 306 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 GUCA1BQ9UMX6 200 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 LMTK3Q96Q04 1460 aa12.99□□□□□ -0.33
TM9SF2-201ENST00000376387 PRPF6O94906 941 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 KRT31Q15323 416 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 TAB2Q9NYJ8 693 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 MST1RQ04912 1400 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms