RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
PDPN-202ENST00000376057 DPF2Q92785 391 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
PDPN-202ENST00000376057 ALG1Q9BT22 464 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 MORC2Q9Y6X9 1032 aaPredicted RBP12.91□□□□□ -0.34
PDPN-202ENST00000376057 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
PDPN-202ENST00000376057 GSE1Q14687 1217 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDPN-202ENST00000376057 NFIAQ12857 509 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 SH3GLB2Q9NR46 395 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 CNPY2Q9Y2B0 182 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 PALM3A6NDB9 673 aaPredicted RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 TBC1D12O60347 775 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 NMT2O60551 498 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 PICALMQ13492 652 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 FAM151AQ8WW52 585 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 MKL1Q969V6 931 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 HERC5Q9UII4 1024 aaKnown RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.34
PDPN-202ENST00000376057 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
PDPN-202ENST00000376057 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
PDPN-202ENST00000376057 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 DLGAP5Q15398 846 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 SLC26A6Q9BXS9 759 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
PDPN-202ENST00000376057 CNTNAP5Q8WYK1 1306 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 RAD17O75943 681 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 RXRAP19793 462 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 RBM5P52756 815 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDPN-202ENST00000376057 TRIM29Q14134 588 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 PKN1Q16512 942 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 KRT40Q6A162 431 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 NUP133Q8WUM0 1156 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 PHKBQ93100 1093 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
PDPN-202ENST00000376057 MAD2L2Q9UI95 211 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 MMP1P03956 469 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 XBP1P17861 261 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 SPZ1Q9BXG8 430 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
PDPN-202ENST00000376057 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
PDPN-202ENST00000376057 TTLL1O95922 423 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
PDPN-202ENST00000376057 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
PDPN-202ENST00000376057 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
PDPN-202ENST00000376057 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
PDPN-202ENST00000376057 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 PGAP2Q9UHJ9 254 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 BCS1LQ9Y276 419 aa12.88□□□□□ -0.35
PDPN-202ENST00000376057 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
PDPN-202ENST00000376057 YEATS4O95619 227 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
PDPN-202ENST00000376057 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
PDPN-202ENST00000376057 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
PDPN-202ENST00000376057 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 SBF1O95248 1867 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 ZNF445P59923 1031 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
PDPN-202ENST00000376057 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 MYO1BO43795 1136 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 AKR1B1P15121 316 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 GALNT17Q6IS24 598 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 ZNF713Q8N859 430 aaPredicted RBP12.86□□□□□ -0.35
PDPN-202ENST00000376057 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
PDPN-202ENST00000376057 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
PDPN-202ENST00000376057 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDPN-202ENST00000376057 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 NLGN2Q8NFZ4 835 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 GINM1Q9NU53 330 aa12.86□□□□□ -0.35
PDPN-202ENST00000376057 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
PDPN-202ENST00000376057 GUCY1A2P33402 732 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms