RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ADGRA1Q86SQ6 560 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 TC2NQ8N9U0 490 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 MIGA1Q8NAN2 632 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 CDC5LQ99459 802 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.72□□□□□ -0.051e-12■■■■□ 21.6
MSH5-204ENST00000375755 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 RTL9Q8NET4 1388 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 COL1A1P02452 1464 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 SMIM22K7EJ46 135 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 UQCRFS1P1P0C7P4 283 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 MARCKSP29966 332 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 PNOCQ13519 176 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 WWC2Q6AWC2 1192 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 HNRNPLLQ8WVV9 542 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 MRPL44Q9H9J2 332 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 GEMIN8Q9NWZ8 242 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 RGS17Q9UGC6 210 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 JRKLQ9Y4A0 524 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.05
MSH5-204ENST00000375755 KIF28PB7ZC32 967 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 ANKRD65E5RJM6 399 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 STX10O60499 249 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 CUTAO60888 179 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 HDXQ7Z353 690 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 TBC1D10CQ8IV04 446 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 TFCP2L1Q9NZI6 479 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 TACC3Q9Y6A5 838 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 UTRNP46939 3433 aa14.71□□□□□ -0.05
MSH5-204ENST00000375755 ANO1Q5XXA6 986 aa14.71□□□□□ -0.06
MSH5-204ENST00000375755 C8orf76Q96K31 380 aa14.71□□□□□ -0.06
MSH5-204ENST00000375755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.7□□□□□ -0.06
MSH5-204ENST00000375755 LOC102724159A0A0B4J2E5 919 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 MBD4O95243 580 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 MTF1Q14872 753 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 NFIXQ14938 502 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 PWP2Q15269 919 aaKnown RBP14.7□□□□□ -0.06
MSH5-204ENST00000375755 TTF1Q15361 905 aaPredicted RBP14.7□□□□□ -0.06
MSH5-204ENST00000375755 EPB41L4AQ9HCS5 686 aaPredicted RBP14.7□□□□□ -0.06
MSH5-204ENST00000375755 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 BSDC1Q9NW68 430 aaPredicted RBP14.7□□□□□ -0.06
MSH5-204ENST00000375755 ABCF2Q9UG63 623 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 L1RE1Q9UN81 338 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 GUCY2CP25092 1073 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 TM4SF1P30408 202 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 SYKP43405 635 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 USP5P45974 858 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 ANTXR2P58335 489 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 PDE4BQ07343 736 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 SLC10A5Q5PT55 438 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 TXNRD3Q86VQ6 643 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 RAB21Q9UL25 225 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 DOCK2Q92608 1830 aa14.7□□□□□ -0.06
MSH5-204ENST00000375755 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 IMMTQ16891 758 aaKnown RBP14.69□□□□□ -0.06
MSH5-204ENST00000375755 LRRC31Q6UY01 552 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 LCORLQ8N3X6 602 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 NLRP3Q96P20 1036 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 STRBPQ96SI9 672 aaKnown RBP14.69□□□□□ -0.06
MSH5-204ENST00000375755 ZNF213O14771 459 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 SYNE3Q6ZMZ3 975 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 DHX37Q8IY37 1157 aaKnown RBP14.69□□□□□ -0.06
MSH5-204ENST00000375755 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 GPR101Q96P66 508 aaPredicted RBP14.69□□□□□ -0.06
MSH5-204ENST00000375755 SENP2Q9HC62 589 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 COL24A1Q17RW2 1714 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 A0A0U1RQJ8 604 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 CDC27P30260 824 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 CTDSPL2Q05D32 466 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 MSANTD4Q8NCY6 345 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 ATRIPQ8WXE1 791 aa14.69□□□□□ -0.06
MSH5-204ENST00000375755 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
MSH5-204ENST00000375755 PHACTR2O75167 634 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 CORO7P57737 925 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 RPS8P62241 208 aaKnown RBP14.68□□□□□ -0.06
MSH5-204ENST00000375755 TPTE2Q6XPS3 522 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 BRAPQ7Z569 592 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 FOXP4Q8IVH2 680 aaPredicted RBP14.68□□□□□ -0.06
MSH5-204ENST00000375755 TEX2Q8IWB9 1127 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 DRC1Q96MC2 740 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
MSH5-204ENST00000375755 TFRCP02786 760 aaKnown RBP14.68□□□□□ -0.06
MSH5-204ENST00000375755 OLFM4Q6UX06 510 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 CYB5R4Q7L1T6 521 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 MB21D2Q8IYB1 491 aaPredicted RBP14.68□□□□□ -0.06
MSH5-204ENST00000375755 PLEKHA4Q9H4M7 779 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 LZTFL1Q9NQ48 299 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 HPSEQ9Y251 543 aa14.68□□□□□ -0.06
MSH5-204ENST00000375755 PRC1O43663 620 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 BMP6P22004 513 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 SHC4Q6S5L8 630 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 METTL16Q86W50 562 aaKnown RBP14.67□□□□□ -0.06
MSH5-204ENST00000375755 PROM2Q8N271 834 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 MSL3Q8N5Y2 521 aaKnown RBP14.67□□□□□ -0.06
MSH5-204ENST00000375755 ZNF384Q8TF68 577 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 TAOK2Q9UL54 1235 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms