RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RLBP1P12271 317 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 RENBPP51606 427 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 DEPDC4Q8N2C3 294 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 NRAPQ86VF7 1730 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 KDRP35968 1356 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 MUSKO15146 869 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 KATNA1O75449 491 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 TRIM14Q14142 442 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 FAM133BQ5BKY9 247 aaKnown RBP10.31□□□□□ -0.76
UBR4-201ENST00000375218 IRGCQ6NXR0 463 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 OLFML1Q6UWY5 402 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 AXIN2Q9Y2T1 843 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 STXBP3O00186 592 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 SGTAO43765 313 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 KINO60870 393 aaKnown RBP10.31□□□□□ -0.76
UBR4-201ENST00000375218 TRIM68Q6AZZ1 485 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 CCDC65Q8IXS2 484 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 ANKRD49Q8WVL7 239 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 TTC14Q96N46 770 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 PDRG1Q9NUG6 133 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 NUDCQ9Y266 331 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 ATP8A1Q9Y2Q0 1164 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 IPPQ9Y573 584 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 CRB1P82279 1406 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 ANKARQ7Z5J8 1434 aa10.31□□□□□ -0.76
UBR4-201ENST00000375218 A0A0B4J203 849 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 CPLX1O14810 134 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 JAKMIP2Q96AA8 810 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 EPB41L4AQ9HCS5 686 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 NSD2O96028 1365 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 BAIAP3O94812 1187 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 MRPS35P82673 323 aaKnown RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 CDCA2Q69YH5 1023 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 FAM180BQ6P0A1 224 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 ENPP3O14638 875 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 XPOTO43592 962 aaKnown RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 PREPLQ4J6C6 727 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 OSBPL5Q9H0X9 879 aaPredicted RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 RRP7AQ9Y3A4 280 aaKnown RBP10.3□□□□□ -0.76
UBR4-201ENST00000375218 BCAR3O75815 825 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 MAPK8P45983 427 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 MASP1P48740 699 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 WDR45BQ5MNZ6 344 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 VPS33BQ9H267 617 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 SAGE1Q9NXZ1 904 aa10.3□□□□□ -0.76
UBR4-201ENST00000375218 CTHP32929 405 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 SARSP49591 514 aaKnown RBP10.29□□□□□ -0.76
UBR4-201ENST00000375218 RACK1P63244 317 aaKnown RBP10.29□□□□□ -0.76
UBR4-201ENST00000375218 EXOSC10Q01780 885 aaKnown RBP10.29□□□□□ -0.76
UBR4-201ENST00000375218 LMNB2Q03252 620 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 MYBPC3Q14896 1274 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 ARHGAP27Q6ZUM4 889 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 CATSPER4Q7RTX7 472 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 PRM3Q9NNZ6 103 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 MAP7D1Q3KQU3 841 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 RILPL1Q5EBL4 403 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 DHRS1Q96LJ7 313 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 ISM2Q6H9L7 571 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 LVRNQ6Q4G3 990 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 KIAA0825Q8IV33 1275 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 LILRB2Q8N423 598 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 GIMAP1Q8WWP7 306 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 ASIC4Q96FT7 647 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 BICD1Q96G01 975 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 ZNF304Q9HCX3 659 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 AFG3L2Q9Y4W6 797 aa10.29□□□□□ -0.76
UBR4-201ENST00000375218 SASH1O94885 1247 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 RPL17P18621 184 aaKnown RBP10.28□□□□□ -0.76
UBR4-201ENST00000375218 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.761e-10■□□□□ 8.6
UBR4-201ENST00000375218 ANKRD18BA2A2Z9 1011 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 PLEKHG4Q58EX7 1191 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 TMCO3Q6UWJ1 677 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 LGR6Q9HBX8 967 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 COL22A1Q8NFW1 1626 aaPredicted RBP10.28□□□□□ -0.76
UBR4-201ENST00000375218 RGS20O76081 388 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 MATR3P43243 847 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBR4-201ENST00000375218 TEX11Q8IYF3 940 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 CDK5RAP3Q96JB5 506 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 TIGD1Q96MW7 591 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 KDM2BQ8NHM5 1336 aa10.28□□□□□ -0.76
UBR4-201ENST00000375218 CCDC66A2RUB6 948 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 FAM83GA6ND36 823 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 NR1I2O75469 434 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms