RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 ZFPM1Q8IX07 1006 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 SHMT1P34896 483 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 TBC1D10BQ4KMP7 808 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 TATDN1Q6P1N9 297 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 APOBEC3FQ8IUX4 373 aaKnown RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 HOOK2Q96ED9 719 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 MAP3K14Q99558 947 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 NCOA5Q9HCD5 579 aaKnown RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
PTPN20-202ENST00000374339 RBM28Q9NW13 759 aaKnown RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 GREB1LQ9C091 1923 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-202ENST00000374339 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
PTPN20-202ENST00000374339 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 TBC1D12O60347 775 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 CLCN6P51797 869 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 RTN1Q16799 776 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-202ENST00000374339 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 FAM184AQ8NB25 1140 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
PTPN20-202ENST00000374339 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTPN20-202ENST00000374339 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
PTPN20-202ENST00000374339 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 NMT2O60551 498 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-202ENST00000374339 EGFRP00533 1210 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
PTPN20-202ENST00000374339 KIF5BP33176 963 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 RASA3Q14644 834 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-202ENST00000374339 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-202ENST00000374339 DNAJC18Q9H819 358 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
PTPN20-202ENST00000374339 MTMR4Q9NYA4 1195 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 STX8Q9UNK0 236 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
PTPN20-202ENST00000374339 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
PTPN20-202ENST00000374339 STX6O43752 255 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 TTLL1O95922 423 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 AKR1B1P15121 316 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 SYT1P21579 422 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 NOVP48745 357 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 TROAPQ12815 778 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 LARP1BQ659C4 914 aaKnown RBP11.29□□□□□ -0.6
PTPN20-202ENST00000374339 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 TMEM39BQ9GZU3 492 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 SCN4AP35499 1836 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
PTPN20-202ENST00000374339 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 JAK2O60674 1132 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 BRD1O95696 1058 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 IFNAR1P17181 557 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 RXRAP19793 462 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 CDC27P30260 824 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 EPS15P42566 896 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 GNAQP50148 359 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 SSRP1Q08945 709 aaKnown RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 WASF1Q92558 559 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 NTRK3Q16288 839 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms