RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 PKNOX2Q96KN3 472 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CNGA1P29973 690 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 FOSP01100 380 aaPredicted RBP12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CCDC25Q86WR0 208 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 KRT9P35527 623 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 RASA3Q14644 834 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CD19P15391 556 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CAPZA3Q96KX2 299 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 SSH2Q76I76 1423 aa12.32□□□□□ -0.44
PHACTR4-202ENST00000373839 CPLX4Q7Z7G2 160 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 NAPGQ99747 312 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 TCP10Q12799 353 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 EAPPQ56P03 285 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 JPH2Q9BR39 696 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 CTTNBP2NLQ9P2B4 639 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 NT5C2P49902 561 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 BIRC2Q13490 618 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GCNT3O95395 438 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 MAP7Q14244 749 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 USH1GQ495M9 461 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 UTP11Q9Y3A2 253 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 DNMT1P26358 1616 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-202ENST00000373839 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 TMOD1P28289 359 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 ITIH3Q06033 890 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 KCNK9Q9NPC2 374 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 SMCO2A6NFE2 343 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 EBAG9O00559 213 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 DDAH1O94760 285 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 SPOUT1Q5T280 376 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 ARHGEF16Q5VV41 709 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 CC2D2BQ6DHV5 1058 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 NLRP12P59046 1061 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 FYB2Q5VWT5 728 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 SECISBP2LQ93073 1101 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 C8orf74Q6P047 294 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 DDX39AO00148 427 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 PDZD4Q76G19 769 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 VPS16Q9H269 839 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
PHACTR4-202ENST00000373839 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 USP14P54578 494 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 TPD52P55327 224 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 HDXQ7Z353 690 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 XDHP47989 1333 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 PPP2R5EQ16537 467 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 ATP10DQ9P241 1426 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 KRT19P08727 400 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 IL6STP40189 918 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 PRKG1Q13976 671 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 POSTNQ15063 836 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 TNNC2P02585 160 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 MAGEA1P43355 309 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 ICA1Q05084 483 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms