RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ERC1Q8IUD2 1116 aa23.36■■□□□ 1.33
TRAPPC3-204ENST00000373166 RPAP2Q8IXW5 612 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC3-204ENST00000373166 SAP30BPQ9UHR5 308 aaKnown RBP23.36■■□□□ 1.33
TRAPPC3-204ENST00000373166 PLXNB2O15031 1838 aa23.36■■□□□ 1.33
TRAPPC3-204ENST00000373166 CCNA1P78396 465 aa23.35■■□□□ 1.33
TRAPPC3-204ENST00000373166 MAP2K5Q13163 448 aa23.35■■□□□ 1.33
TRAPPC3-204ENST00000373166 EDC3Q96F86 508 aaKnown RBP23.35■■□□□ 1.33
TRAPPC3-204ENST00000373166 RABGAP1Q9Y3P9 1069 aa23.35■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L15C9J2P7 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L13C9JLJ4 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L11C9JVI0 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L18D6R9N7 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L22D6RA61 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L17D6RBQ6 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L19D6RCP7 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L20D6RJB6 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 GH2P01242 217 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 MDM2Q00987 491 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP17L24Q0WX57 530 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 HSP90AB4PQ58FF6 505 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 MFSD14CQ5VZR4 134 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 POTEEQ6S8J3 1075 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 DBNDD2Q9BQY9 259 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 EXOC6BQ9Y2D4 811 aa23.34■■□□□ 1.33
TRAPPC3-204ENST00000373166 ZNF512BQ96KM6 892 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC3-204ENST00000373166 C12orf42Q96LP6 360 aa23.33■■□□□ 1.33
TRAPPC3-204ENST00000373166 FEZ1Q99689 392 aa23.33■■□□□ 1.33
TRAPPC3-204ENST00000373166 USP14P54578 494 aa23.32■■□□□ 1.32
TRAPPC3-204ENST00000373166 LBHD1Q9BQE6 289 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC3-204ENST00000373166 SENP6Q9GZR1 1112 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC3-204ENST00000373166 CYP7A1P22680 504 aa23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 ZAP70P43403 619 aa23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 DYNLL1P63167 89 aaKnown RBP23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 ZYXQ15942 572 aaKnown RBP23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 WDR78Q5VTH9 848 aa23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 TATDN1Q6P1N9 297 aa23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 CERS3Q8IU89 383 aa23.31■■□□□ 1.32
TRAPPC3-204ENST00000373166 CUL9Q8IWT3 2517 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 SLC15A5A6NIM6 579 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 MSCO60682 206 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 PTPREP23469 700 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 DDX20Q9UHI6 824 aaKnown RBP23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 NDUFB9Q9Y6M9 179 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 IVNS1ABPQ9Y6Y0 642 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 SIPA1L1O43166 1804 aa23.3■■□□□ 1.32
TRAPPC3-204ENST00000373166 CNMDO75829 334 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 USP5P45974 858 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 ATP2B2Q01814 1243 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 RAB3GAP1Q15042 981 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 FAM109BQ6ICB4 259 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 CATSPERGQ6ZRH7 1159 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 KIAA1683Q9H0B3 1180 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 SERPINB13Q9UIV8 391 aa23.29■■□□□ 1.32
TRAPPC3-204ENST00000373166 UNC80Q8N2C7 3258 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 CNGA1P29973 690 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 LPAR1Q92633 364 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 EHD4Q9H223 541 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 FLRT1Q9NZU1 646 aa23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 DBNLQ9UJU6 430 aaKnown RBP23.28■■□□□ 1.32
TRAPPC3-204ENST00000373166 MAST2Q6P0Q8 1798 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 IDH1O75874 414 aaKnown RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 HOXC6P09630 235 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 RRP1P56182 461 aaKnown RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 CERKLQ49MI3 558 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 LBX2Q6XYB7 198 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 SIRT2Q8IXJ6 389 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 RHPN1Q8TCX5 695 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 EAF2Q96CJ1 260 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 CCDC8Q9H0W5 538 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 TLR7Q9NYK1 1049 aaKnown RBP23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 PRKAG2Q9UGJ0 569 aa23.27■■□□□ 1.32
TRAPPC3-204ENST00000373166 DNAH12Q6ZR08 3092 aa23.27■■□□□ 1.31
TRAPPC3-204ENST00000373166 APBB1O00213 710 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 DNM1LO00429 736 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 VCAM1P19320 739 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 ATN1P54259 1190 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 GRB14Q14449 540 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 ABCB5Q2M3G0 1257 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 AACSQ86V21 672 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 KIF1BPQ96EK5 621 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
TRAPPC3-204ENST00000373166 ACER1Q8TDN7 264 aa23.25■■□□□ 1.31
TRAPPC3-204ENST00000373166 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
TRAPPC3-204ENST00000373166 BTBD7Q9P203 1132 aa23.25■■□□□ 1.31
TRAPPC3-204ENST00000373166 LAMA2P24043 3122 aaKnown RBP23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 RAB11FIP3O75154 756 aa23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 CYP2C19P33261 490 aa23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 CLASRPQ8N2M8 674 aaKnown RBP23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 MAGEB6Q8N7X4 407 aa23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 RPAP3Q9H6T3 665 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-204ENST00000373166 TMED8Q6PL24 325 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC3-204ENST00000373166 DPP9Q86TI2 863 aa23.23■■□□□ 1.31
TRAPPC3-204ENST00000373166 NPLOC4Q8TAT6 608 aa23.23■■□□□ 1.31
TRAPPC3-204ENST00000373166 GUCD1Q96NT3 240 aa23.23■■□□□ 1.31
TRAPPC3-204ENST00000373166 SPDYE16A6NNV3 312 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms