RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
COL9A2-202ENST00000372748 CDHR2Q9BYE9 1310 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 CTAGE9A4FU28 777 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 ACTN4O43707 911 aaKnown RBP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 SAFBQ15424 915 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 HNRNPLLQ8WVV9 542 aaKnown RBP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 ERLIN1O75477 346 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 MMP1P03956 469 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 CYP19A1P11511 503 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 FXR1P51114 621 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL9A2-202ENST00000372748 OXER1Q8TDS5 423 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 RAB21Q9UL25 225 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 MYH7P12883 1935 aa16.81■□□□□ 0.28
COL9A2-202ENST00000372748 CDC25AP30304 524 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
COL9A2-202ENST00000372748 CASP8Q14790 479 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
COL9A2-202ENST00000372748 CERS3Q8IU89 383 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 MAGEB6Q8N7X4 407 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 NOA1Q8NC60 698 aaKnown RBP16.8■□□□□ 0.28
COL9A2-202ENST00000372748 STRBPQ96SI9 672 aaKnown RBP16.8■□□□□ 0.28
COL9A2-202ENST00000372748 PLEKHA4Q9H4M7 779 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 MFAP3LO75121 409 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 USP5P45974 858 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 MSANTD4Q8NCY6 345 aa16.8■□□□□ 0.28
COL9A2-202ENST00000372748 A0A087X0B3 334 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 PDE8AO60658 829 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 EIF3JO75822 258 aaKnown RBP16.79■□□□□ 0.28
COL9A2-202ENST00000372748 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
COL9A2-202ENST00000372748 STAMQ92783 540 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 TACC3Q9Y6A5 838 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 SYNRGQ9UMZ2 1314 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 ABCC12Q96J65 1359 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 PRKAB2O43741 272 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 MBD4O95243 580 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 FMNL1O95466 1100 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-202ENST00000372748 GYPCP04921 128 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 NCAPH2Q6IBW4 605 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 RASGRP2Q7LDG7 609 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 EPB41L4AQ9HCS5 686 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-202ENST00000372748 ADD3Q9UEY8 706 aaKnown RBP16.79■□□□□ 0.28
COL9A2-202ENST00000372748 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
COL9A2-202ENST00000372748 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-202ENST00000372748 CTAGE8P0CG41 777 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-202ENST00000372748 HSP90B2PQ58FF3 399 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 SPATA1Q5VX52 437 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 CTAGE4Q8IX94 777 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 TRIML1Q8N9V2 468 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 NAPBQ9H115 298 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 XIRP1Q702N8 1843 aaKnown RBP16.78■□□□□ 0.28
COL9A2-202ENST00000372748 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-202ENST00000372748 SGMS1Q86VZ5 419 aa16.78■□□□□ 0.28
COL9A2-202ENST00000372748 ELOA2Q8IYF1 753 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-202ENST00000372748 POTEB2H3BUK9 544 aa16.77■□□□□ 0.28
COL9A2-202ENST00000372748 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-202ENST00000372748 ERVK-24P63145 666 aa16.77■□□□□ 0.28
COL9A2-202ENST00000372748 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
COL9A2-202ENST00000372748 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
COL9A2-202ENST00000372748 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
COL9A2-202ENST00000372748 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.27
COL9A2-202ENST00000372748 LPIN2Q92539 896 aa16.77■□□□□ 0.27
COL9A2-202ENST00000372748 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.27
COL9A2-202ENST00000372748 NAPGQ99747 312 aaPredicted RBP16.77■□□□□ 0.27
COL9A2-202ENST00000372748 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.27
COL9A2-202ENST00000372748 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.27
COL9A2-202ENST00000372748 IFNAR1P17181 557 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 PBX1P40424 430 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 TRIM22Q8IYM9 498 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 GDAP1L1Q96MZ0 367 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 TRIM10Q9UDY6 481 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
COL9A2-202ENST00000372748 PATL2C9JE40 543 aaKnown RBP16.76■□□□□ 0.27
COL9A2-202ENST00000372748 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 CUL4BQ13620 913 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 FAM204AQ9H8W3 233 aa16.76■□□□□ 0.27
COL9A2-202ENST00000372748 hCG_1642624A0A1W2PR95 340 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 IVLP07476 585 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
COL9A2-202ENST00000372748 DPYDQ12882 1025 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 FILIP1LQ4L180 1135 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 KANK3Q6NY19 840 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms