RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
TMEM254-201ENST00000372273 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
TMEM254-201ENST00000372273 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-201ENST00000372273 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 RAD21O60216 631 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 CYP2C8P10632 490 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 TM4SF4P48230 202 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 GTF2A2P52657 109 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-201ENST00000372273 SNAPC2Q13487 334 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
TMEM254-201ENST00000372273 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 ZNF213O14771 459 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
TMEM254-201ENST00000372273 TFAP4Q01664 338 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 ALX1Q15699 326 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 ZKSCAN3Q9BRR0 538 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 CABP5Q9NP86 173 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 NEDD4P46934 1319 aa11.3□□□□□ -0.6
TMEM254-201ENST00000372273 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 CYP21A2P08686 494 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 LBX1P52954 281 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 A0A0G2JLL6 359 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 PDHXO00330 501 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 CETPP11597 493 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 MCM4P33991 863 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 BACE1P56817 501 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 ICA1Q05084 483 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 PDE4BQ07343 736 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 SREBF2Q12772 1141 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 CRHR2Q13324 411 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 IL17RBQ9NRM6 502 aa11.29□□□□□ -0.6
TMEM254-201ENST00000372273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
TMEM254-201ENST00000372273 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 USP17L10C9JJH3 530 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 TSPY3P0CV98 308 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 TSPY8P0CW00 308 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 CAP1Q01518 475 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
TMEM254-201ENST00000372273 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 FEZ1Q99689 392 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 RBM8AQ9Y5S9 174 aaKnown RBP11.28□□□□□ -0.6
TMEM254-201ENST00000372273 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
TMEM254-201ENST00000372273 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 B4E1Z4 1266 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 CXCL11O14625 94 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 ST18O60284 1047 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 ANAPC4Q9UJX5 808 aa11.28□□□□□ -0.6
TMEM254-201ENST00000372273 RAD50Q92878 1312 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 KDM4AO75164 1064 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 MCCP23508 829 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
TMEM254-201ENST00000372273 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
TMEM254-201ENST00000372273 GBP4Q96PP9 640 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 NUP88Q99567 741 aaPredicted RBP11.27□□□□□ -0.61
TMEM254-201ENST00000372273 WDR18Q9BV38 432 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 STX8Q9UNK0 236 aa11.27□□□□□ -0.61
TMEM254-201ENST00000372273 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
TMEM254-201ENST00000372273 DDIT3P35638 169 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 INHBEP58166 350 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
TMEM254-201ENST00000372273 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 AS3MTQ9HBK9 375 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 MTMR4Q9NYA4 1195 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 CPA4Q9UI42 421 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 FGRP09769 529 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
TMEM254-201ENST00000372273 VCAM1P19320 739 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 PTMSP20962 102 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms