RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 SIRT2Q8IXJ6 389 aa22.38■■□□□ 1.17
NDUFA1-201ENST00000371437 C12orf42Q96LP6 360 aa22.38■■□□□ 1.17
NDUFA1-201ENST00000371437 PPP4R2Q9NY27 417 aa22.38■■□□□ 1.17
NDUFA1-201ENST00000371437 COL6A3P12111 3177 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 ZNF236Q9UL36 1845 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 SURF6O75683 361 aaKnown RBP22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 CNMDO75829 334 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 COL6A1P12109 1028 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 MAPK4P31152 587 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 OS9Q13438 667 aaPredicted RBP22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 TATDN1Q6P1N9 297 aa22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 EAF2Q96CJ1 260 aaPredicted RBP22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 CCDC8Q9H0W5 538 aaPredicted RBP22.37■■□□□ 1.17
NDUFA1-201ENST00000371437 LTBP2Q14767 1821 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 GH2P01242 217 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 HLA-DOAP06340 250 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 CYP7A1P22680 504 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 CCND3P30281 292 aaPredicted RBP22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 LHX8Q68G74 356 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 USP17L2Q6R6M4 530 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 PAGR1Q9BTK6 254 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 TRIM34Q9BYJ4 488 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
NDUFA1-201ENST00000371437 ZKSCAN1P17029 563 aaPredicted RBP22.35■■□□□ 1.17
NDUFA1-201ENST00000371437 MAGEA10P43363 369 aaPredicted RBP22.35■■□□□ 1.17
NDUFA1-201ENST00000371437 MIGA1Q8NAN2 632 aa22.35■■□□□ 1.17
NDUFA1-201ENST00000371437 GTF3C2Q8WUA4 911 aaPredicted RBP22.35■■□□□ 1.17
NDUFA1-201ENST00000371437 ZNFX1Q9P2E3 1918 aaKnown RBP22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 RGS2P41220 211 aa22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 HDAC1Q13547 482 aaPredicted RBP22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 PLEKHH3Q7Z736 793 aa22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 APBA2Q99767 749 aa22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 ANTXR1Q9H6X2 564 aa22.34■■□□□ 1.17
NDUFA1-201ENST00000371437 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 HMMRO75330 724 aa22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 IDH1O75874 414 aaKnown RBP22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 ZYXQ15942 572 aaKnown RBP22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 TRMT44Q8IYL2 757 aaKnown RBP22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 MAGEB6Q8N7X4 407 aa22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 EHD4Q9H223 541 aa22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 RWDD1Q9H446 243 aaPredicted RBP22.33■■□□□ 1.17
NDUFA1-201ENST00000371437 MYH7P12883 1935 aa22.33■■□□□ 1.16
NDUFA1-201ENST00000371437 COL11A1P12107 1806 aaPredicted RBP22.32■■□□□ 1.16
NDUFA1-201ENST00000371437 ACER1Q8TDN7 264 aa22.32■■□□□ 1.16
NDUFA1-201ENST00000371437 FLRT1Q9NZU1 646 aa22.32■■□□□ 1.16
NDUFA1-201ENST00000371437 GUCY1A2P33402 732 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 MAP2K5Q13163 448 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 LRRC26Q2I0M4 334 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 LRIT3Q3SXY7 679 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 GPR153Q6NV75 609 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 CATSPERGQ6ZRH7 1159 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 RABGAP1Q9Y3P9 1069 aa22.31■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L15C9J2P7 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L13C9JLJ4 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L11C9JVI0 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L18D6R9N7 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L22D6RA61 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L17D6RBQ6 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L19D6RCP7 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L20D6RJB6 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 IGHDP01880 384 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 VCAM1P19320 739 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 SHMT1P34896 483 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP5P45974 858 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 USP17L24Q0WX57 530 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 LBX2Q6XYB7 198 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 TDHQ8IZJ6 230 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 SLC17A8Q8NDX2 589 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 CCDC136Q96JN2 1154 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 RIOK1Q9BRS2 568 aaKnown RBP22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 KIAA1683Q9H0B3 1180 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 BTBD7Q9P203 1132 aa22.3■■□□□ 1.16
NDUFA1-201ENST00000371437 PLCD1P51178 756 aa22.29■■□□□ 1.16
NDUFA1-201ENST00000371437 EVX2Q03828 476 aa22.29■■□□□ 1.16
NDUFA1-201ENST00000371437 Q7L0L9 218 aa22.29■■□□□ 1.16
NDUFA1-201ENST00000371437 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
NDUFA1-201ENST00000371437 FEZ1Q99689 392 aa22.29■■□□□ 1.16
NDUFA1-201ENST00000371437 PTPREP23469 700 aa22.28■■□□□ 1.16
NDUFA1-201ENST00000371437 GABPAQ06546 454 aa22.28■■□□□ 1.16
NDUFA1-201ENST00000371437 RAB3GAP1Q15042 981 aa22.28■■□□□ 1.16
NDUFA1-201ENST00000371437 CERKLQ49MI3 558 aaPredicted RBP22.28■■□□□ 1.16
NDUFA1-201ENST00000371437 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
NDUFA1-201ENST00000371437 SPDYE16A6NNV3 312 aaPredicted RBP22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 IGHA2P01877 340 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 USP14P54578 494 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 ABCB5Q2M3G0 1257 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 B4GALNT3Q6L9W6 998 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 CCAR1Q8IX12 1150 aaKnown RBP22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 NPLOC4Q8TAT6 608 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 PLXNA1Q9UIW2 1896 aa22.27■■□□□ 1.16
NDUFA1-201ENST00000371437 SLC15A5A6NIM6 579 aa22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 HOXC6P09630 235 aa22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 GRB14Q14449 540 aa22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 TTC6Q86TZ1 520 aa22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 UBE2OQ9C0C9 1292 aaKnown RBP22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 EXOC6BQ9Y2D4 811 aa22.26■■□□□ 1.15
NDUFA1-201ENST00000371437 SMCHD1A6NHR9 2005 aa22.25■■□□□ 1.15
NDUFA1-201ENST00000371437 DLL1O00548 723 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms