RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 PALD1Q9ULE6 856 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 USP17L10C9JJH3 530 aa18.27■□□□□ 0.52
SS18L1-202ENST00000370848 ERC2O15083 957 aa18.27■□□□□ 0.52
SS18L1-202ENST00000370848 FARP2O94887 1054 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-202ENST00000370848 MBD4O95243 580 aa18.27■□□□□ 0.52
SS18L1-202ENST00000370848 USP5P45974 858 aa18.27■□□□□ 0.52
SS18L1-202ENST00000370848 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-202ENST00000370848 ALPK3Q96L96 1907 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 LAMA3Q16787 3333 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 PRKAB2O43741 272 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 HMGCRP04035 888 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 HLA-DOAP06340 250 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 UBE3CQ15386 1083 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
SS18L1-202ENST00000370848 SDR42E1Q8WUS8 393 aa18.26■□□□□ 0.51
SS18L1-202ENST00000370848 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
SS18L1-202ENST00000370848 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
SS18L1-202ENST00000370848 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
SS18L1-202ENST00000370848 HERVK_113P62684 666 aa18.25■□□□□ 0.51
SS18L1-202ENST00000370848 EVX2Q03828 476 aa18.25■□□□□ 0.51
SS18L1-202ENST00000370848 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
SS18L1-202ENST00000370848 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
SS18L1-202ENST00000370848 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
SS18L1-202ENST00000370848 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SS18L1-202ENST00000370848 PDE4AP27815 886 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 ZSCAN25Q6NSZ9 544 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 USP6NLQ92738 828 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 OSBP2Q969R2 916 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
SS18L1-202ENST00000370848 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.24■□□□□ 0.515e-6■■■□□ 19.2
SS18L1-202ENST00000370848 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
SS18L1-202ENST00000370848 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 RNF113AO15541 343 aaKnown RBP18.23■□□□□ 0.51
SS18L1-202ENST00000370848 GDF11O95390 407 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
SS18L1-202ENST00000370848 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 SOCS4Q8WXH5 440 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
SS18L1-202ENST00000370848 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 RBPJLQ9UBG7 517 aa18.23■□□□□ 0.51
SS18L1-202ENST00000370848 A0A1W2PPC1 479 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 M0R2C6 588 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 CYP2D6P10635 497 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 GABPAQ06546 454 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 GPRC5AQ8NFJ5 357 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
SS18L1-202ENST00000370848 TRIM34Q9BYJ4 488 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 KIAA1683Q9H0B3 1180 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 NR2E3Q9Y5X4 410 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 A0A0G2JMZ2 1700 aa18.22■□□□□ 0.51
SS18L1-202ENST00000370848 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 GH2P01242 217 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 MAPK4P31152 587 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 MNX1P50219 401 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-202ENST00000370848 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 ERVK-24P63145 666 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
SS18L1-202ENST00000370848 TRIB2Q92519 343 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 APPBP2Q92624 585 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 DPF3Q92784 378 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-202ENST00000370848 ZNF236Q9UL36 1845 aa18.21■□□□□ 0.51
SS18L1-202ENST00000370848 SHMT1P34896 483 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 PLCD1P51178 756 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 MORN1Q5T089 497 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
SS18L1-202ENST00000370848 OGDHLQ9ULD0 1010 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 SLC4A4Q9Y6R1 1079 aa18.2■□□□□ 0.5
SS18L1-202ENST00000370848 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 ZFYP08048 801 aaPredicted RBP18.19■□□□□ 0.5
SS18L1-202ENST00000370848 USP14P54578 494 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
SS18L1-202ENST00000370848 NUDT12Q9BQG2 462 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 HMX1Q9NP08 348 aaPredicted RBP18.19■□□□□ 0.5
SS18L1-202ENST00000370848 RABGAP1Q9Y3P9 1069 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 MYH7P12883 1935 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 RLFQ13129 1914 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
SS18L1-202ENST00000370848 GPAA1O43292 621 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 CNMDO75829 334 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 TFRCP02786 760 aaKnown RBP18.18■□□□□ 0.5
SS18L1-202ENST00000370848 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
SS18L1-202ENST00000370848 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 Q3C1V9 767 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 PORCNQ9H237 461 aa18.18■□□□□ 0.5
SS18L1-202ENST00000370848 OSBPL3Q9H4L5 887 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms