RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 SCRN1Q12765 414 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 KCNJ12Q14500 433 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 MAGI2Q86UL8 1455 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 FAM170AA1A519 330 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 IL13P35225 146 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 RFC1P35251 1148 aaPredicted RBP14.09□□□□□ -0.15
GPC4-201ENST00000370828 RBL2Q08999 1139 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
GPC4-201ENST00000370828 VPS52Q8N1B4 723 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
GPC4-201ENST00000370828 RAB3IL1Q8TBN0 382 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 NLRC4Q9NPP4 1024 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
GPC4-201ENST00000370828 CREB3O43889 395 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 STARD3NLO95772 234 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 UQCRFS1P1P0C7P4 283 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 DIXDC1Q155Q3 683 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
GPC4-201ENST00000370828 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 CALML3P27482 149 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 PDCLQ13371 301 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 DENND2CQ68D51 928 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 PIK3AP1Q6ZUJ8 805 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 KSR1Q8IVT5 923 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 OSBPL3Q9H4L5 887 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
GPC4-201ENST00000370828 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 RANBP1P43487 201 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.16
GPC4-201ENST00000370828 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.16
GPC4-201ENST00000370828 A0A1W2PQ27 194 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 A0A1W2PQ64 194 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 IKBKBO14920 756 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 DEXIO95424 95 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 NAPAP54920 295 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 SARM1Q6SZW1 724 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 TSKSQ9UJT2 592 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 TCP1P17987 556 aaKnown RBP14.08□□□□□ -0.16
GPC4-201ENST00000370828 IFNAR2P48551 515 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 C2orf54Q08AI8 447 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 NNTQ13423 1086 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 KRT79Q5XKE5 535 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 VSTM4Q8IW00 320 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 TEX11Q8IYF3 940 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 DPH5Q9H2P9 285 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 DNAJC8O75937 253 aaPredicted RBP14.08□□□□□ -0.16
GPC4-201ENST00000370828 SNRPA1P09661 255 aaKnown RBP14.08□□□□□ -0.16
GPC4-201ENST00000370828 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
GPC4-201ENST00000370828 KBTBD3Q8NAB2 608 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 RCOR1Q9UKL0 485 aa14.08□□□□□ -0.16
GPC4-201ENST00000370828 FYB2Q5VWT5 728 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 SSH3Q8TE77 659 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 EEF2KMTQ96G04 330 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 CTIFO43310 598 aaKnown RBP14.07□□□□□ -0.16
GPC4-201ENST00000370828 MORC3Q14149 939 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 SPATA1Q5VX52 437 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 VCX3AQ9NNX9 186 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 RTEL1Q9NZ71 1219 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 V9GY48 417 aaPredicted RBP14.07□□□□□ -0.16
GPC4-201ENST00000370828 KCNK3O14649 394 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 PLCD1P51178 756 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
GPC4-201ENST00000370828 UAP1Q16222 522 aaPredicted RBP14.07□□□□□ -0.16
GPC4-201ENST00000370828 ASIC2Q16515 512 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 TTC38Q5R3I4 469 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 CCDC197Q8NCU1 140 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 KLHL14Q9P2G3 628 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 CUL7Q14999 1698 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
GPC4-201ENST00000370828 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 STX2P32856 288 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 EYA1Q99502 592 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 PLCB1Q9NQ66 1216 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 TMEM51Q9NW97 253 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 STAP2Q9UGK3 403 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 USH1CQ9Y6N9 552 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 CYP2E1P05181 493 aaPredicted RBP14.06□□□□□ -0.16
GPC4-201ENST00000370828 EPHB4P54760 987 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 KLHL30Q0D2K2 578 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
GPC4-201ENST00000370828 ADD1P35611 737 aaKnown RBP14.06□□□□□ -0.16
GPC4-201ENST00000370828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
GPC4-201ENST00000370828 PDE6BP35913 854 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 APBA1Q02410 837 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 FAM133BQ5BKY9 247 aaKnown RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 STXBP4Q6ZWJ1 553 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 ZNF274Q96GC6 653 aaPredicted RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 SUCLG2Q96I99 432 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 TMEM87BQ96K49 555 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 PUS7Q96PZ0 661 aaKnown RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 POLE2P56282 527 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms