RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TMEM94Q12767 1356 aa21.9■■□□□ 1.1
LMO4-202ENST00000370544 LIN9Q5TKA1 542 aa21.9■■□□□ 1.1
LMO4-202ENST00000370544 ADALQ6DHV7 355 aa21.9■■□□□ 1.1
LMO4-202ENST00000370544 CMTR1Q8N1G2 835 aaKnown RBP21.9■■□□□ 1.1
LMO4-202ENST00000370544 UBLCP1Q8WVY7 318 aaPredicted RBP21.9■■□□□ 1.1
LMO4-202ENST00000370544 MRPL44Q9H9J2 332 aaKnown RBP21.9■■□□□ 1.1
LMO4-202ENST00000370544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.9■■□□□ 1.1
LMO4-202ENST00000370544 TXNDC16Q9P2K2 825 aa21.9■■□□□ 1.1
LMO4-202ENST00000370544 TMTC1Q8IUR5 882 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 SECISBP2LQ93073 1101 aaKnown RBP21.89■■□□□ 1.1
LMO4-202ENST00000370544 NOX5Q96PH1 765 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 MRPS9P82933 396 aaKnown RBP21.89■■□□□ 1.1
LMO4-202ENST00000370544 TUBB2AQ13885 445 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 NOSTRINQ8IVI9 506 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 KIFC2Q96AC6 838 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 TUBB2BQ9BVA1 445 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 AGTPBP1Q9UPW5 1226 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
LMO4-202ENST00000370544 TTC37Q6PGP7 1564 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 BRDTQ58F21 947 aaPredicted RBP21.89■■□□□ 1.09
LMO4-202ENST00000370544 ARFGAP2Q8N6H7 521 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 KDM5CP41229 1560 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.09
LMO4-202ENST00000370544 ZBTB9Q96C00 473 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 AZI2Q9H6S1 392 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 GREM2Q9H772 168 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 ADCY9O60503 1353 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 PROSER3Q2NL68 480 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 NT5C3AQ9H0P0 336 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 ATP8A2Q9NTI2 1148 aa21.89■■□□□ 1.09
LMO4-202ENST00000370544 EXOC3O60645 756 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 NBPF11Q86T75 865 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
LMO4-202ENST00000370544 COPRSQ9NQ92 184 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 UGGT1Q9NYU2 1555 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 CDAN1Q8IWY9 1227 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 FANCBQ8NB91 859 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 TNKSO95271 1327 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 CSRNP2Q9H175 543 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 ZHX1Q9UKY1 873 aaPredicted RBP21.88■■□□□ 1.09
LMO4-202ENST00000370544 PFKFB1P16118 471 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 SLC8A3P57103 927 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 TAF12Q16514 161 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 DNAJC21Q5F1R6 531 aaKnown RBP21.88■■□□□ 1.09
LMO4-202ENST00000370544 BLIDQ8IZY5 108 aa21.88■■□□□ 1.09
LMO4-202ENST00000370544 MED23Q9ULK4 1368 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 FGAP02671 866 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 KCNK9Q9NPC2 374 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 C8orf74Q6P047 294 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 FAM169AQ9Y6X4 670 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 FNBP4Q8N3X1 1017 aaPredicted RBP21.87■■□□□ 1.09
LMO4-202ENST00000370544 UBL4BQ8N7F7 174 aa21.87■■□□□ 1.09
LMO4-202ENST00000370544 KDM3AQ9Y4C1 1321 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 ARHGAP6O43182 974 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 ERCC3P19447 782 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 SIK1P57059 783 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 ARHGEF25Q86VW2 580 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 CIAO1O76071 339 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 CRKLP46109 303 aaKnown RBP21.86■■□□□ 1.09
LMO4-202ENST00000370544 ZBTB16Q05516 673 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 USP6P35125 1406 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 ZEB2O60315 1214 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 CCDC14Q49A88 953 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 UTP14CQ5TAP6 766 aaKnown RBP21.86■■□□□ 1.09
LMO4-202ENST00000370544 KIAA1524Q8TCG1 905 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 CHURC1Q8WUH1 139 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 TIGD1Q96MW7 591 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 FRMPD2Q68DX3 1309 aaPredicted RBP21.86■■□□□ 1.09
LMO4-202ENST00000370544 MTX1Q13505 466 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 USPL1Q5W0Q7 1092 aa21.86■■□□□ 1.09
LMO4-202ENST00000370544 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 BTDP43251 543 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 FAM76AQ8TAV0 307 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 GPHNQ9NQX3 736 aaPredicted RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 TMEM63CQ9P1W3 806 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 PNMA1Q8ND90 353 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 NOD1Q9Y239 953 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 PDE8BO95263 885 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 ERCC5P28715 1186 aaPredicted RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 ADD1P35611 737 aaKnown RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 RNASE9P60153 205 aaKnown RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 CCDC121Q6ZUS5 278 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 TPH2Q8IWU9 490 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 TRMT2AQ8IZ69 625 aaKnown RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 STAP2Q9UGK3 403 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 RGS12O14924 1447 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 KDM6BO15054 1643 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 UBE3CQ15386 1083 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 LONRF3Q496Y0 759 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 CPLX4Q7Z7G2 160 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 GPR161Q8N6U8 529 aaKnown RBP21.85■■□□□ 1.09
LMO4-202ENST00000370544 USP28Q96RU2 1077 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 GINS2Q9Y248 185 aa21.85■■□□□ 1.09
LMO4-202ENST00000370544 DDAH1O94760 285 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 INF2Q27J81 1249 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 PUS3Q9BZE2 481 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms