RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 MCM9Q9NXL9 1143 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 GJD2Q9UKL4 321 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 RABGAP1Q9Y3P9 1069 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 SHMT1P34896 483 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 ERVK-9P63128 1117 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 ERVK-24P63145 666 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 HABP4Q5JVS0 413 aaKnown RBP19.49■□□□□ 0.71
VMA21-202ENST00000370361 LBX2Q6XYB7 198 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 ANKLE1Q8NAG6 615 aa19.49■□□□□ 0.71
VMA21-202ENST00000370361 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
VMA21-202ENST00000370361 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
VMA21-202ENST00000370361 ADD2P35612 726 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 PLCD1P51178 756 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 UBE3CQ15386 1083 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 GPATCH3Q96I76 525 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 CRISPLD2Q9H0B8 497 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 RPTORQ8N122 1335 aa19.48■□□□□ 0.71
VMA21-202ENST00000370361 TFRCP02786 760 aaKnown RBP19.47■□□□□ 0.71
VMA21-202ENST00000370361 TMEM179Q6ZVK1 233 aa19.47■□□□□ 0.71
VMA21-202ENST00000370361 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.47■□□□□ 0.71
VMA21-202ENST00000370361 BOLA2Q9H3K6 86 aa19.47■□□□□ 0.71
VMA21-202ENST00000370361 SH2D4AQ9H788 454 aa19.47■□□□□ 0.71
VMA21-202ENST00000370361 HMX1Q9NP08 348 aaPredicted RBP19.47■□□□□ 0.71
VMA21-202ENST00000370361 RBPJLQ9UBG7 517 aa19.47■□□□□ 0.71
VMA21-202ENST00000370361 VCAM1P19320 739 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 RGS2P41220 211 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
VMA21-202ENST00000370361 CATSPERGQ6ZRH7 1159 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 LCORLQ8N3X6 602 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 DPF3Q92784 378 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 CCDC17Q96LX7 622 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 DEFB118Q96PH6 123 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 TXNRD2Q9NNW7 524 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 MYH7P12883 1935 aa19.46■□□□□ 0.71
VMA21-202ENST00000370361 PLEKHH3Q7Z736 793 aa19.45■□□□□ 0.7
VMA21-202ENST00000370361 LPAR1Q92633 364 aa19.45■□□□□ 0.7
VMA21-202ENST00000370361 CWC22Q9HCG8 908 aaKnown RBP19.45■□□□□ 0.7
VMA21-202ENST00000370361 GPR142Q7Z601 462 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 APBA2Q99767 749 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 PAGR1Q9BTK6 254 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 ECHDC1Q9NTX5 307 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 HOXC10Q9NYD6 342 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 PLXNB2O15031 1838 aa19.44■□□□□ 0.7
VMA21-202ENST00000370361 MYH8P13535 1937 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 H0YGN5 161 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 MPHOSPH10O00566 681 aaKnown RBP19.43■□□□□ 0.7
VMA21-202ENST00000370361 MBD4O95243 580 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 ZKSCAN1P17029 563 aaPredicted RBP19.43■□□□□ 0.7
VMA21-202ENST00000370361 LRRFIP1Q32MZ4 808 aaKnown RBP19.43■□□□□ 0.7
VMA21-202ENST00000370361 MORN1Q5T089 497 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 USP6NLQ92738 828 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 ARMT1Q9H993 441 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 ARHGEF10LQ9HCE6 1279 aa19.43■□□□□ 0.7
VMA21-202ENST00000370361 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 SEPT2Q15019 361 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
VMA21-202ENST00000370361 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 TRIB2Q92519 343 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
VMA21-202ENST00000370361 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
VMA21-202ENST00000370361 DCTPP1Q9H773 170 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
VMA21-202ENST00000370361 CEP290O15078 2479 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 SLC15A5A6NIM6 579 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 ZFYP08048 801 aaPredicted RBP19.41■□□□□ 0.7
VMA21-202ENST00000370361 CYP2B6P20813 491 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 COG2Q14746 738 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 C20orf194Q5TEA3 1177 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 GIMAP6Q6P9H5 292 aa19.41■□□□□ 0.7
VMA21-202ENST00000370361 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
VMA21-202ENST00000370361 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
VMA21-202ENST00000370361 Q3C1V9 767 aa19.4■□□□□ 0.7
VMA21-202ENST00000370361 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
VMA21-202ENST00000370361 PORCNQ9H237 461 aa19.4■□□□□ 0.7
VMA21-202ENST00000370361 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
VMA21-202ENST00000370361 EVI5O60447 810 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 HOXC6P09630 235 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 PRKAR2AP13861 404 aaKnown RBP19.39■□□□□ 0.69
VMA21-202ENST00000370361 ICA1Q05084 483 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 KBTBD3Q8NAB2 608 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 SHCBP1Q8NEM2 672 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 OGDHLQ9ULD0 1010 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 COLQQ9Y215 455 aaPredicted RBP19.39■□□□□ 0.69
VMA21-202ENST00000370361 TMX2Q9Y320 296 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 SLC4A4Q9Y6R1 1079 aa19.39■□□□□ 0.69
VMA21-202ENST00000370361 USP17L12C9JPN9 530 aa19.38■□□□□ 0.69
VMA21-202ENST00000370361 USP17L21D6R901 530 aa19.38■□□□□ 0.69
VMA21-202ENST00000370361 STRNO43815 780 aa19.38■□□□□ 0.69
VMA21-202ENST00000370361 CNMDO75829 334 aa19.38■□□□□ 0.69
VMA21-202ENST00000370361 MFSD14CQ5VZR4 134 aa19.38■□□□□ 0.69
VMA21-202ENST00000370361 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms