RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 ARMT1Q9H993 441 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 L1RE1Q9UN81 338 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 UBR1Q8IWV7 1749 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 BMP6P22004 513 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 USP6P35125 1406 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 PAFAH1B1P43034 410 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 KIF5AQ12840 1032 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 E2F5Q15329 346 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 CTAGE1Q96RT6 745 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 MMRN2Q9H8L6 949 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 KRT86O43790 486 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 NLRP5P59047 1200 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 WASF1Q92558 559 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
PRPF38B-201ENST00000370021 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 HOXB7P09629 217 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 CCDC42Q96M95 316 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 GCP02774 474 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 NOP2P46087 812 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 PLCD1P51178 756 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 SPATA1Q5VX52 437 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 KANK3Q6NY19 840 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 MAGEB6Q8N7X4 407 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 ENOX1Q8TC92 643 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 APPBP2Q92624 585 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 KIFC2Q96AC6 838 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 CCDC114Q96M63 670 aa11.71□□□□□ -0.53
PRPF38B-201ENST00000370021 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 ESYT3A0FGR9 886 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 MARCH6O60337 910 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 MBD4O95243 580 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 RESP18Q5W5W9 173 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 TAX1BP1Q86VP1 789 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 NELFBQ8WX92 580 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 SECISBP2LQ93073 1101 aaKnown RBP11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 MED4Q9NPJ6 270 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 FAM53CQ9NYF3 392 aa11.71□□□□□ -0.54
PRPF38B-201ENST00000370021 TRIM49BA6NDI0 452 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 MFAP3LO75121 409 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 TBC1D8BQ0IIM8 1120 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 IFT88Q13099 833 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 CTCFLQ8NI51 663 aaPredicted RBP11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 ALDH8A1Q9H2A2 487 aaPredicted RBP11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 BAZ2BQ9UIF8 2168 aaKnown RBP11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 BUB1O43683 1085 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 ANTXR2P58335 489 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC113Q9H0I3 377 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 TUBE1Q9UJT0 475 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 KCNJ18B7U540 433 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 MYO1FO00160 1098 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 MCM3P25205 808 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 NF2P35240 595 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 KCNJ12Q14500 433 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 TBC1D10CQ8IV04 446 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 KIRREL3Q8IZU9 778 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 DUSP10Q9Y6W6 482 aa11.7□□□□□ -0.54
PRPF38B-201ENST00000370021 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 KRT31Q15323 416 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 PIK3AP1Q6ZUJ8 805 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 CACNA2D4Q7Z3S7 1137 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms