RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 RCN2Q14257 317 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 ATL3Q6DD88 541 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 CYTH2Q99418 400 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
LCA5-201ENST00000369846 SHANK2Q9UPX8 1470 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 CNGA1P29973 690 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 DDIT3P35638 169 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 APBA1Q02410 837 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 PTPN21Q16825 1174 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 NBPF9Q3BBW0 867 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 DCAF17Q5H9S7 520 aaPredicted RBP9.46□□□□□ -0.89
LCA5-201ENST00000369846 MAP7D3Q8IWC1 876 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 OR8K1Q8NGG5 319 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.89
LCA5-201ENST00000369846 STAMQ92783 540 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 ZBTB10Q96DT7 871 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 IWS1Q96ST2 819 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 VPS37BQ9H9H4 285 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 HELLSQ9NRZ9 838 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 CCDC169A6NNP5 214 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 GFAPP14136 432 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 CCDC93Q567U6 631 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 NAIF1Q69YI7 327 aaPredicted RBP9.46□□□□□ -0.89
LCA5-201ENST00000369846 HS2ST1Q7LGA3 356 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 ZNF444Q8N0Y2 327 aaPredicted RBP9.46□□□□□ -0.89
LCA5-201ENST00000369846 TRIM58Q8NG06 486 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 PRAM1Q96QH2 718 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 HYOU1Q9Y4L1 999 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.46□□□□□ -0.89
LCA5-201ENST00000369846 SAMD9LQ8IVG5 1584 aa9.46□□□□□ -0.89
LCA5-201ENST00000369846 TTC41PQ6P2S7 1318 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 KCNK3O14649 394 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 NR1D1P20393 614 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 FBLN1P23142 703 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 CYP2C19P33261 490 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 MSH2P43246 934 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 AFAP1Q8N556 730 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 MYD88Q99836 296 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 PTPRCP08575 1304 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 NSD3Q9BZ95 1437 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 EVI5O60447 810 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 DKC1O60832 514 aaKnown RBP eCLIP9.46□□□□□ -0.9
LCA5-201ENST00000369846 FLOT1O75955 427 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 RWDD2BP57060 319 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 PDCD2Q16342 344 aaPredicted RBP9.46□□□□□ -0.9
LCA5-201ENST00000369846 ADAT2Q7Z6V5 191 aaKnown RBP9.46□□□□□ -0.9
LCA5-201ENST00000369846 CCDC13Q8IYE1 715 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 TRIML2Q8N7C3 387 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 HAUS4Q9H6D7 363 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
LCA5-201ENST00000369846 FAM207AQ9NSI2 230 aaPredicted RBP9.46□□□□□ -0.9
LCA5-201ENST00000369846 KLC4Q9NSK0 619 aa9.46□□□□□ -0.9
LCA5-201ENST00000369846 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.46□□□□□ -0.9
LCA5-201ENST00000369846 RASSF10A6NK89 507 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 TCP1P17987 556 aaKnown RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 MFSD4BQ5TF39 518 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 FGD4Q96M96 766 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 EPC1Q9H2F5 836 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 NLRC4Q9NPP4 1024 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 FANCLQ9NW38 375 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 TSC22D4Q9Y3Q8 395 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 CARMIL2Q6F5E8 1435 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 ABCC2Q92887 1545 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 KRIT1O00522 736 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 CC2D1AQ6P1N0 951 aaPredicted RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 MBIPQ9NS73 344 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 TSPY2A6NKD2 308 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 TNIP1Q15025 636 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 GRAMD1BQ3KR37 738 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 SNRNP27Q8WVK2 155 aaKnown RBP9.45□□□□□ -0.9
LCA5-201ENST00000369846 TEKT1Q969V4 418 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 OSBPL9Q96SU4 736 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
LCA5-201ENST00000369846 A0A087WWV3 80 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 BUB1O43683 1085 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 TADA3O75528 432 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 EEF1DP29692 281 aaKnown RBP9.44□□□□□ -0.9
LCA5-201ENST00000369846 MCMDC2Q4G0Z9 681 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 KRT80Q6KB66 452 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 KIAA2013Q8IYS2 634 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 LRRC8CQ8TDW0 803 aa9.44□□□□□ -0.9
LCA5-201ENST00000369846 CSRNP2Q9H175 543 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms