RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MKNK2Q9HBH9 465 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 NAP1L2Q9ULW6 460 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-203ENST00000369747 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
UBE3D-203ENST00000369747 TNNI2P48788 182 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 NASPP49321 788 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-203ENST00000369747 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 TEPSINQ96N21 525 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 RBSNQ9H1K0 784 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 EHD4Q9H223 541 aa20.17■□□□□ 0.82
UBE3D-203ENST00000369747 RESTQ13127 1097 aa20.16■□□□□ 0.82
UBE3D-203ENST00000369747 PRAMEF18Q5VWM3 479 aa20.16■□□□□ 0.82
UBE3D-203ENST00000369747 USP50Q70EL3 339 aaPredicted RBP20.16■□□□□ 0.82
UBE3D-203ENST00000369747 CRACR2BQ8N4Y2 399 aaPredicted RBP20.16■□□□□ 0.82
UBE3D-203ENST00000369747 ESR2Q92731 530 aa20.16■□□□□ 0.82
UBE3D-203ENST00000369747 ZKSCAN3Q9BRR0 538 aa20.16■□□□□ 0.82
UBE3D-203ENST00000369747 RASA1P20936 1047 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 SHMT1P34896 483 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 APOBEC3FQ8IUX4 373 aaKnown RBP20.15■□□□□ 0.82
UBE3D-203ENST00000369747 KLF18A0A0U1RQI7 1052 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 H3BQV1 296 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 EAPPQ56P03 285 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-203ENST00000369747 IFFO2Q5TF58 517 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 ZNF526Q8TF50 670 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-203ENST00000369747 CHMP4CQ96CF2 233 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 ELP1O95163 1332 aa20.15■□□□□ 0.82
UBE3D-203ENST00000369747 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 METTL16Q86W50 562 aaKnown RBP20.14■□□□□ 0.81
UBE3D-203ENST00000369747 FOXP4Q8IVH2 680 aaPredicted RBP20.14■□□□□ 0.81
UBE3D-203ENST00000369747 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 NMT2O60551 498 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 POTEIP0CG38 1075 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 POTEJP0CG39 1038 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 TFAP4Q01664 338 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 ZNF287Q9HBT7 754 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 KIF3AQ9Y496 699 aa20.14■□□□□ 0.81
UBE3D-203ENST00000369747 MYH8P13535 1937 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 TSPY2A6NKD2 308 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 GOLGA8BA8MQT2 603 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
UBE3D-203ENST00000369747 NBPF12Q5TAG4 269 aaPredicted RBP20.13■□□□□ 0.81
UBE3D-203ENST00000369747 ZNF444Q8N0Y2 327 aaPredicted RBP20.13■□□□□ 0.81
UBE3D-203ENST00000369747 ZSCAN16Q9H4T2 348 aaPredicted RBP20.13■□□□□ 0.81
UBE3D-203ENST00000369747 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 SWAP70Q9UH65 585 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
UBE3D-203ENST00000369747 IGDCC4Q8TDY8 1250 aa20.12■□□□□ 0.81
UBE3D-203ENST00000369747 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
UBE3D-203ENST00000369747 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 PNMA8AQ86V59 439 aaPredicted RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 TRIM34Q9BYJ4 488 aa20.12■□□□□ 0.81
UBE3D-203ENST00000369747 NMRK2Q9NPI5 230 aa20.12■□□□□ 0.81
UBE3D-203ENST00000369747 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
UBE3D-203ENST00000369747 TFIP11Q9UBB9 837 aaKnown RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
UBE3D-203ENST00000369747 ADM5C9JUS6 153 aa20.11■□□□□ 0.81
UBE3D-203ENST00000369747 IFIT3O14879 490 aaKnown RBP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 TSPY3P0CV98 308 aa20.11■□□□□ 0.81
UBE3D-203ENST00000369747 TSPY8P0CW00 308 aa20.11■□□□□ 0.81
UBE3D-203ENST00000369747 FOSBP53539 338 aa20.11■□□□□ 0.81
UBE3D-203ENST00000369747 RRP1BQ14684 758 aaKnown RBP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 TATDN1Q6P1N9 297 aa20.11■□□□□ 0.81
UBE3D-203ENST00000369747 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 LEO1Q8WVC0 666 aaPredicted RBP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 HERC5Q9UII4 1024 aaKnown RBP20.11■□□□□ 0.81
UBE3D-203ENST00000369747 AKR1B1P15121 316 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 TMEM67Q5HYA8 995 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 KRT26Q7Z3Y9 468 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 SULF1Q8IWU6 871 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 ZSCAN10Q96SZ4 725 aaPredicted RBP20.1■□□□□ 0.81
UBE3D-203ENST00000369747 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
UBE3D-203ENST00000369747 TNKSO95271 1327 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 IQCA1Q86XH1 822 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 RAB11FIP4Q86YS3 637 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
UBE3D-203ENST00000369747 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 SPATA32Q96LK8 384 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 TSPY26PQ9H489 355 aa20.1■□□□□ 0.81
UBE3D-203ENST00000369747 DHX16O60231 1041 aaKnown RBP20.09■□□□□ 0.81
UBE3D-203ENST00000369747 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
UBE3D-203ENST00000369747 LY9Q9HBG7 655 aa20.09■□□□□ 0.81
UBE3D-203ENST00000369747 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
UBE3D-203ENST00000369747 TBC1D12O60347 775 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 ADD1P35611 737 aaKnown RBP20.08■□□□□ 0.81
UBE3D-203ENST00000369747 JAG1P78504 1218 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 MAP3K10Q02779 954 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 SEC23AQ15436 765 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 NEDD1Q8NHV4 660 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
UBE3D-203ENST00000369747 LETM1O95202 739 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms