RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TATDN1Q6P1N9 297 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 CCDC17Q96LX7 622 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 CSRNP1Q96S65 589 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 KAT14Q9H8E8 782 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 GPRC5DQ9NZD1 345 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 RBM26Q5T8P6 1007 aaKnown RBP27.86■■■□□ 2.05
SNX3-203ENST00000368979 CEP95Q96GE4 821 aa27.86■■■□□ 2.05
SNX3-203ENST00000368979 FAM196BA6NMK8 535 aa27.85■■■□□ 2.05
SNX3-203ENST00000368979 IFNAR1P17181 557 aa27.85■■■□□ 2.05
SNX3-203ENST00000368979 TBC1D10BQ4KMP7 808 aaPredicted RBP27.85■■■□□ 2.05
SNX3-203ENST00000368979 TRIM34Q9BYJ4 488 aa27.85■■■□□ 2.05
SNX3-203ENST00000368979 PGAP2Q9UHJ9 254 aa27.85■■■□□ 2.05
SNX3-203ENST00000368979 STK36Q9NRP7 1315 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 H7C1D1 291 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 PPFIA3O75145 1194 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 FOXD4L5Q5VV16 416 aaPredicted RBP27.84■■■□□ 2.05
SNX3-203ENST00000368979 C9orf131Q5VYM1 1079 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 PNMA1Q8ND90 353 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 FOXD4L4Q8WXT5 416 aaPredicted RBP27.84■■■□□ 2.05
SNX3-203ENST00000368979 TMEM47Q9BQJ4 181 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 RBM28Q9NW13 759 aaKnown RBP27.84■■■□□ 2.05
SNX3-203ENST00000368979 ORC3Q9UBD5 711 aaPredicted RBP27.84■■■□□ 2.05
SNX3-203ENST00000368979 HERC5Q9UII4 1024 aaKnown RBP27.84■■■□□ 2.05
SNX3-203ENST00000368979 STX8Q9UNK0 236 aa27.84■■■□□ 2.05
SNX3-203ENST00000368979 GBP4Q96PP9 640 aa27.83■■■□□ 2.05
SNX3-203ENST00000368979 MAP3K14Q99558 947 aa27.83■■■□□ 2.05
SNX3-203ENST00000368979 MTMR4Q9NYA4 1195 aa27.83■■■□□ 2.05
SNX3-203ENST00000368979 VPS37CA5D8V6 355 aaPredicted RBP27.82■■■□□ 2.04
SNX3-203ENST00000368979 F13A1P00488 732 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 TNNI2P48788 182 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 TMEM39BQ9GZU3 492 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 TNFAIP1Q13829 316 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 CERKLQ49MI3 558 aaPredicted RBP27.82■■■□□ 2.04
SNX3-203ENST00000368979 CDC37L1Q7L3B6 337 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 NBPF11Q86T75 865 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 PHKBQ93100 1093 aa27.82■■■□□ 2.04
SNX3-203ENST00000368979 BAG4O95429 457 aaKnown RBP27.81■■■□□ 2.04
SNX3-203ENST00000368979 FMNL1O95466 1100 aaPredicted RBP27.81■■■□□ 2.04
SNX3-203ENST00000368979 TOP1P11387 765 aaKnown RBP27.81■■■□□ 2.04
SNX3-203ENST00000368979 CTCFLQ8NI51 663 aaPredicted RBP27.81■■■□□ 2.04
SNX3-203ENST00000368979 ASTN2O75129 1339 aaPredicted RBP27.8■■■□□ 2.04
SNX3-203ENST00000368979 DDNO94850 711 aaPredicted RBP27.8■■■□□ 2.04
SNX3-203ENST00000368979 GPR162Q16538 588 aa27.8■■■□□ 2.04
SNX3-203ENST00000368979 CDAN1Q8IWY9 1227 aa27.8■■■□□ 2.04
SNX3-203ENST00000368979 HACL1Q9UJ83 578 aa27.8■■■□□ 2.04
SNX3-203ENST00000368979 TBC1D12O60347 775 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 MCM4P33991 863 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 SSRP1Q08945 709 aaKnown RBP27.79■■■□□ 2.04
SNX3-203ENST00000368979 FUT2Q10981 343 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 RASA3Q14644 834 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 GRM4Q14833 912 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 TMTC3Q6ZXV5 915 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 TRPM4Q8TD43 1214 aa27.79■■■□□ 2.04
SNX3-203ENST00000368979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.79■■■□□ 2.04
SNX3-203ENST00000368979 MPHOSPH10O00566 681 aaKnown RBP27.78■■■□□ 2.04
SNX3-203ENST00000368979 PPP4R3BQ5MIZ7 849 aa27.78■■■□□ 2.04
SNX3-203ENST00000368979 RGS22Q8NE09 1264 aa27.78■■■□□ 2.04
SNX3-203ENST00000368979 SLC26A6Q9BXS9 759 aa27.78■■■□□ 2.04
SNX3-203ENST00000368979 H3BQV1 296 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 PLEKHA8P1O95397 391 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 TTLL1O95922 423 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 KIF5BP33176 963 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 EPS15P42566 896 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 IFFO2Q5TF58 517 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 TEPSINQ96N21 525 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 GRIN3BO60391 1043 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 MAP3K10Q02779 954 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 TMEM179Q6ZVK1 233 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 CLEC10AQ8IUN9 316 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 TRIM22Q8IYM9 498 aa27.77■■■□□ 2.04
SNX3-203ENST00000368979 CMTR1Q8N1G2 835 aaKnown RBP27.77■■■□□ 2.04
SNX3-203ENST00000368979 RNF26Q9BY78 433 aaPredicted RBP27.77■■■□□ 2.04
SNX3-203ENST00000368979 RRP1BQ14684 758 aaKnown RBP27.76■■■□□ 2.03
SNX3-203ENST00000368979 ABCB5Q2M3G0 1257 aa27.76■■■□□ 2.03
SNX3-203ENST00000368979 SHROOM1Q2M3G4 852 aaPredicted RBP27.76■■■□□ 2.03
SNX3-203ENST00000368979 GUCY1A2P33402 732 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 FOSBP53539 338 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 NBR1Q14596 966 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 C8orf76Q96K31 380 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 ALG1Q9BT22 464 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 MAD2L2Q9UI95 211 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 CNTNAP5Q8WYK1 1306 aa27.75■■■□□ 2.03
SNX3-203ENST00000368979 ZC3H4Q9UPT8 1303 aaKnown RBP27.75■■■□□ 2.03
SNX3-203ENST00000368979 GDF11O95390 407 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 DEXIO95424 95 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 CCDC82Q8N4S0 544 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 SRBD1Q8N5C6 995 aaKnown RBP27.74■■■□□ 2.03
SNX3-203ENST00000368979 WASF1Q92558 559 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 KANSL2Q9H9L4 492 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 SCAF8Q9UPN6 1271 aaKnown RBP27.74■■■□□ 2.03
SNX3-203ENST00000368979 ATP6V1DQ9Y5K8 247 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 MYH4Q9Y623 1939 aa27.74■■■□□ 2.03
SNX3-203ENST00000368979 LMOD1P29536 600 aaPredicted RBP27.73■■■□□ 2.03
SNX3-203ENST00000368979 HIRAP54198 1017 aaPredicted RBP27.73■■■□□ 2.03
SNX3-203ENST00000368979 ANGEL2Q5VTE6 544 aaKnown RBP27.73■■■□□ 2.03
SNX3-203ENST00000368979 APOBEC3FQ8IUX4 373 aaKnown RBP27.73■■■□□ 2.03
SNX3-203ENST00000368979 FBXO18Q8NFZ0 1043 aa27.73■■■□□ 2.03
SNX3-203ENST00000368979 AIFM3Q96NN9 605 aa27.73■■■□□ 2.03
SNX3-203ENST00000368979 NYAP2Q9P242 653 aa27.73■■■□□ 2.03
SNX3-203ENST00000368979 CLIP2Q9UDT6 1046 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms