RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GNAT2P19087 354 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 CTGFP29279 349 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 PPATQ06203 517 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 PI16Q6UXB8 463 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 CCDC84Q86UT8 332 aaPredicted RBP10.44□□□□□ -0.74
SNX27-201ENST00000368838 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
SNX27-201ENST00000368838 ZSCAN29Q8IWY8 852 aaPredicted RBP10.44□□□□□ -0.74
SNX27-201ENST00000368838 ARMC5Q96C12 935 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 HOOK2Q96ED9 719 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 EDC3Q96F86 508 aaKnown RBP10.44□□□□□ -0.74
SNX27-201ENST00000368838 ANTXR1Q9H6X2 564 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 ZSWIM6Q9HCJ5 1215 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 CTNNA3Q9UI47 895 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 PDHXO00330 501 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 WDHD1O75717 1129 aaPredicted RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 HMGB1P09429 215 aaKnown RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 CYP2C8P10632 490 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 PSMA5P28066 241 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 PTH1RQ03431 593 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 SPTY2D1Q68D10 685 aaPredicted RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 SH3BP5LQ7L8J4 393 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 OSBP2Q969R2 916 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 ZNF333Q96JL9 665 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 DDX4Q9NQI0 724 aaKnown RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 RBM8AQ9Y5S9 174 aaKnown RBP10.43□□□□□ -0.74
SNX27-201ENST00000368838 SNX14Q9Y5W7 946 aa10.43□□□□□ -0.74
SNX27-201ENST00000368838 LOC285556D6RIA3 1793 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 ATRNL1Q5VV63 1379 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 DDTLA6NHG4 134 aaPredicted RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 K7ELQ4 463 aaPredicted RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 GPR37O15354 613 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 HSPD1P10809 573 aaKnown RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 PDE6AP16499 860 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 BTDP43251 543 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 PDE4DQ08499 809 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 MOGSQ13724 837 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 KIF22Q14807 665 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 SLC9C2Q5TAH2 1124 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 VPS53Q5VIR6 699 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 CREB3L3Q68CJ9 461 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 ZNF589Q86UQ0 364 aaPredicted RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 FAM163AQ96GL9 167 aaPredicted RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 MTA3Q9BTC8 594 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 PIH1D3Q9NQM4 214 aaKnown RBP10.42□□□□□ -0.74
SNX27-201ENST00000368838 ZNF112Q9UJU3 913 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 ALPK3Q96L96 1907 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
SNX27-201ENST00000368838 SLC27A2O14975 620 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
SNX27-201ENST00000368838 DDIT3P35638 169 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 PSMC4P43686 418 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 MECOMQ03112 1051 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 ARHGEF6Q15052 776 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 MTFR1Q15390 333 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 C17orf99Q6UX52 265 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 GADL1Q6ZQY3 521 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 ZNF384Q8TF68 577 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 TTC14Q96N46 770 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 AGXT2Q9BYV1 514 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 GPHNQ9NQX3 736 aaPredicted RBP10.41□□□□□ -0.74
SNX27-201ENST00000368838 PALD1Q9ULE6 856 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 KCNH4Q9UQ05 1017 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 ZHX2Q9Y6X8 837 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 TRIOBPQ9H2D6 2365 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 MYH7P12883 1935 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 MYH8P13535 1937 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 GAKO14976 1311 aa10.41□□□□□ -0.74
SNX27-201ENST00000368838 PHF20L1A8MW92 1017 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 FOXP2O15409 715 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 GPAA1O43292 621 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 PCP11498 1178 aaKnown RBP10.4□□□□□ -0.74
SNX27-201ENST00000368838 OSBPP22059 807 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 PPP4CP60510 307 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 CUL4AQ13619 759 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
SNX27-201ENST00000368838 GPAT2Q6NUI2 795 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 ANKRD23Q86SG2 305 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 NBPF11Q86T75 865 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 SCYL3Q8IZE3 742 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
SNX27-201ENST00000368838 BCL11AQ9H165 835 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 PICK1Q9NRD5 415 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 PLXNB2O15031 1838 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 MROH7-TTC4A0A0A0MT08 1334 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 ADGRA2Q96PE1 1338 aa10.4□□□□□ -0.74
SNX27-201ENST00000368838 TRIM75PA6NK02 468 aa10.39□□□□□ -0.75
SNX27-201ENST00000368838 PATL2C9JE40 543 aaKnown RBP10.39□□□□□ -0.75
SNX27-201ENST00000368838 ENTPD3O75355 529 aa10.39□□□□□ -0.75
SNX27-201ENST00000368838 CYP21A2P08686 494 aa10.39□□□□□ -0.75
SNX27-201ENST00000368838 PTPRAP18433 802 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms