RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 NACAP1Q9BZK3 213 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 KIAA1683Q9H0B3 1180 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 OSBPL3Q9H4L5 887 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 EMILIN3Q9NT22 766 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 TRIM6-TRIM34B2RNG4 842 aa28.62■■■□□ 2.17
PFDN2-201ENST00000368010 PATL2C9JE40 543 aaKnown RBP28.62■■■□□ 2.17
PFDN2-201ENST00000368010 HOXA7P31268 230 aaPredicted RBP28.62■■■□□ 2.17
PFDN2-201ENST00000368010 GCLCP48506 637 aaPredicted RBP28.62■■■□□ 2.17
PFDN2-201ENST00000368010 ZYXQ15942 572 aaKnown RBP28.62■■■□□ 2.17
PFDN2-201ENST00000368010 ACER1Q8TDN7 264 aa28.62■■■□□ 2.17
PFDN2-201ENST00000368010 C12orf42Q96LP6 360 aa28.62■■■□□ 2.17
PFDN2-201ENST00000368010 MINDY4BA8MYZ0 360 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 FMNL1O95466 1100 aaPredicted RBP28.61■■■□□ 2.17
PFDN2-201ENST00000368010 AKR1B1P15121 316 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 FCGRTP55899 365 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 TICAM2Q86XR7 235 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 IFNL3Q8IZI9 196 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 TRIM47Q96LD4 638 aa28.61■■■□□ 2.17
PFDN2-201ENST00000368010 ZSWIM8A7E2V4 1837 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 HOXD10P28358 340 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 CTGFP29279 349 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 PRMT2P55345 433 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 FAM110CQ1W6H9 321 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 ANKRD13CQ8N6S4 541 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 ROBO3Q96MS0 1386 aa28.6■■■□□ 2.17
PFDN2-201ENST00000368010 RILPL2Q969X0 211 aa28.59■■■□□ 2.17
PFDN2-201ENST00000368010 PTCH2Q9Y6C5 1203 aa28.59■■■□□ 2.17
PFDN2-201ENST00000368010 NAPBQ9H115 298 aa28.58■■■□□ 2.17
PFDN2-201ENST00000368010 HELLSQ9NRZ9 838 aa28.58■■■□□ 2.17
PFDN2-201ENST00000368010 MYH8P13535 1937 aa28.58■■■□□ 2.17
PFDN2-201ENST00000368010 ICA1Q05084 483 aa28.57■■■□□ 2.16
PFDN2-201ENST00000368010 CCDC129Q6ZRS4 1044 aa28.57■■■□□ 2.16
PFDN2-201ENST00000368010 SRRDQ9UH36 339 aa28.57■■■□□ 2.16
PFDN2-201ENST00000368010 VCAM1P19320 739 aa28.56■■■□□ 2.16
PFDN2-201ENST00000368010 HERVK_113P62684 666 aa28.56■■■□□ 2.16
PFDN2-201ENST00000368010 STK11IPQ8N1F8 1099 aa28.56■■■□□ 2.16
PFDN2-201ENST00000368010 P2RX7Q99572 595 aaKnown RBP28.56■■■□□ 2.16
PFDN2-201ENST00000368010 MKNK2Q9HBH9 465 aa28.56■■■□□ 2.16
PFDN2-201ENST00000368010 ARHGEF10LQ9HCE6 1279 aa28.56■■■□□ 2.16
PFDN2-201ENST00000368010 MYPNQ86TC9 1320 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 A0A1W2PRG0 241 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L15C9J2P7 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L13C9JLJ4 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L11C9JVI0 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L18D6R9N7 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L22D6RA61 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L17D6RBQ6 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L19D6RCP7 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L20D6RJB6 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 SOX10P56693 466 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 USP17L24Q0WX57 530 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 FAM227BQ96M60 508 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 SH2D4AQ9H788 454 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 ZNF287Q9HBT7 754 aa28.55■■■□□ 2.16
PFDN2-201ENST00000368010 TNPO2O14787 897 aaKnown RBP28.54■■■□□ 2.16
PFDN2-201ENST00000368010 SLC9C1Q4G0N8 1177 aa28.54■■■□□ 2.16
PFDN2-201ENST00000368010 CLEC10AQ8IUN9 316 aa28.54■■■□□ 2.16
PFDN2-201ENST00000368010 GTF3C2Q8WUA4 911 aaPredicted RBP28.54■■■□□ 2.16
PFDN2-201ENST00000368010 ARMC5Q96C12 935 aa28.54■■■□□ 2.16
PFDN2-201ENST00000368010 MORF4L1Q9UBU8 362 aa28.54■■■□□ 2.16
PFDN2-201ENST00000368010 A0A0D9SFI3 127 aa28.53■■■□□ 2.16
PFDN2-201ENST00000368010 RASA1P20936 1047 aa28.53■■■□□ 2.16
PFDN2-201ENST00000368010 MCMDC2Q4G0Z9 681 aa28.53■■■□□ 2.16
PFDN2-201ENST00000368010 KANSL2Q9H9L4 492 aa28.53■■■□□ 2.16
PFDN2-201ENST00000368010 TMX2Q9Y320 296 aa28.53■■■□□ 2.16
PFDN2-201ENST00000368010 SLC3A2P08195 630 aaKnown RBP28.52■■■□□ 2.16
PFDN2-201ENST00000368010 NMIQ13287 307 aaPredicted RBP28.52■■■□□ 2.16
PFDN2-201ENST00000368010 NBPF11Q86T75 865 aa28.52■■■□□ 2.16
PFDN2-201ENST00000368010 RAET1EQ8TD07 263 aa28.52■■■□□ 2.16
PFDN2-201ENST00000368010 RPAP3Q9H6T3 665 aaPredicted RBP28.52■■■□□ 2.16
PFDN2-201ENST00000368010 FOXP2O15409 715 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 PDE4AP27815 886 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 PRKCZQ05513 592 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 PPARAQ07869 468 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 CATSPERGQ6ZRH7 1159 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 SIAH1Q8IUQ4 282 aa28.51■■■□□ 2.15
PFDN2-201ENST00000368010 SDSP20132 328 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 RGS19P49795 217 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 ATP2B2Q01814 1243 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 VPS53Q5VIR6 699 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 ZNF444Q8N0Y2 327 aaPredicted RBP28.5■■■□□ 2.15
PFDN2-201ENST00000368010 GPRC5AQ8NFJ5 357 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 LPAR1Q92633 364 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 COA7Q96BR5 231 aa28.5■■■□□ 2.15
PFDN2-201ENST00000368010 MGAMO43451 1857 aa28.49■■■□□ 2.15
PFDN2-201ENST00000368010 EEF2P13639 858 aaKnown RBP28.49■■■□□ 2.15
PFDN2-201ENST00000368010 PDE4BQ07343 736 aa28.49■■■□□ 2.15
PFDN2-201ENST00000368010 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.49■■■□□ 2.15
PFDN2-201ENST00000368010 VCPKMTQ9H867 229 aa28.49■■■□□ 2.15
PFDN2-201ENST00000368010 PRDM1O75626 825 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 SH3TC2Q8TF17 1288 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 ZNF333Q96JL9 665 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 PAGR1Q9BTK6 254 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 TXNRD2Q9NNW7 524 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 RBPJLQ9UBG7 517 aa28.48■■■□□ 2.15
PFDN2-201ENST00000368010 CCDC171Q6TFL3 1326 aa28.47■■■□□ 2.15
PFDN2-201ENST00000368010 HIP1O00291 1037 aa28.47■■■□□ 2.15
PFDN2-201ENST00000368010 DIAPH3Q9NSV4 1193 aa28.47■■■□□ 2.15
PFDN2-201ENST00000368010 GABRQQ9UN88 632 aa28.47■■■□□ 2.15
PFDN2-201ENST00000368010 FLT3LGP49771 235 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms