RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
TPR-201ENST00000367478 ZBTB21Q9ULJ3 1066 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 NOP56O00567 594 aaKnown RBP13.68□□□□□ -0.22
TPR-201ENST00000367478 ZNF75DP51815 510 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 NLRP12P59046 1061 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
TPR-201ENST00000367478 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
TPR-201ENST00000367478 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 KIFC3Q9BVG8 833 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 ATP5J2-PTCD1G3V325 749 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 POLR2BP30876 1174 aaKnown RBP13.68□□□□□ -0.22
TPR-201ENST00000367478 EYA3Q99504 573 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 NT5C3AQ9H0P0 336 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 KRT81Q14533 505 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 CTAGE3PQ8IX95 158 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 LRRC8CQ8TDW0 803 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 CENPKQ9BS16 269 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 ESYT2A0FGR8 921 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 STAT1P42224 750 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 RAD51AP2Q09MP3 1159 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 PICALMQ13492 652 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 SCHIP1Q9P0W5 487 aaPredicted RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 IL9RQ01113 521 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 SCOCQ9UIL1 159 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 MAN1A2O60476 641 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 PYGLP06737 847 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 EFCAB8A8MWE9 144 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 CLTAP09496 248 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 POSTNQ15063 836 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 LONRF2Q1L5Z9 754 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 RINT1Q6NUQ1 792 aa13.67□□□□□ -0.22
TPR-201ENST00000367478 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 MRPL44Q9H9J2 332 aaKnown RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 S100BP04271 92 aaPredicted RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 RNASE9P60153 205 aaKnown RBP13.67□□□□□ -0.22
TPR-201ENST00000367478 EIF3DO15371 548 aaKnown RBP eCLIP13.66□□□□□ -0.22
TPR-201ENST00000367478 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 APOBRQ0VD83 1088 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 LRRC23Q53EV4 343 aaPredicted RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 TMTC3Q6ZXV5 915 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 EFCAB13Q8IY85 973 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 MGARPQ8TDB4 240 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 TEKT2Q9UIF3 430 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 M0QZ92 97 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 PRPF6O94906 941 aaKnown RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 CLSTN2Q9H4D0 955 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 SLMAPQ14BN4 828 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 HGSO14964 777 aaPredicted RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 ZNF202O95125 648 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 PICK1Q9NRD5 415 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 H0YCG3 227 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 KRIT1O00522 736 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 TTI1O43156 1089 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
TPR-201ENST00000367478 TTLL3Q9Y4R7 772 aa13.66□□□□□ -0.22
TPR-201ENST00000367478 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 SKIP12755 728 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 KPNA2P52292 529 aaKnown RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 CALCRLQ16602 461 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 GCNT3O95395 438 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 TTC1Q99614 292 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 PASKQ96RG2 1323 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 LPXNO60711 386 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 OATP04181 439 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 ZNF445P59923 1031 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 KRT25Q7Z3Z0 450 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 SCYL1Q96KG9 808 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms