RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 TAF5LO75529 589 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 TIMM10P62072 90 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 TBC1D7Q9P0N9 293 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 NUP160Q12769 1436 aa17.39■□□□□ 0.38
NUCKS1-201ENST00000367142 HMGB1P1B2RPK0 211 aaPredicted RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 PFDN6O15212 129 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 TNNC2P02585 160 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 MAN1A1P33908 653 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 DYMQ7RTS9 669 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 GAS7O60861 476 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 OTUD7BQ6GQQ9 843 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 TRIM50Q86XT4 487 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 HPDP32754 393 aaPredicted RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 CTDSPL2Q05D32 466 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 ATP2A3Q93084 1043 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 SLC27A2O14975 620 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 KRT81Q14533 505 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 FAM102BQ5T8I3 360 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 ADPGKQ9BRR6 497 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 ABL1P00519 1130 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 PSMD6Q15008 389 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 RSRC1Q96IZ7 334 aaKnown RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
NUCKS1-201ENST00000367142 VAMP4O75379 141 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 PDZD4Q76G19 769 aaPredicted RBP17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 TPH2Q8IWU9 490 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGAP24Q8N264 748 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 CAPN9O14815 690 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 GNA14O95837 355 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 ZNF131P52739 623 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 CEP120Q8N960 986 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 H0YCG3 227 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 SFMBT2Q5VUG0 894 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
NUCKS1-201ENST00000367142 TESPA1A2RU30 521 aaPredicted RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 KLHL30Q0D2K2 578 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 MCUR1Q96AQ8 359 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 GBP1P32455 592 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 MLKLQ8NB16 471 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 MYO1AQ9UBC5 1043 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 GTF2A1P52655 376 aaPredicted RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 CCDC105Q8IYK2 499 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 ATP8A2Q9NTI2 1148 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 GOLGA8CPA6NN73 597 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 CEP104O60308 925 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 HOXB7P09629 217 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 PRIM1P49642 420 aaKnown RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 BEND3Q5T5X7 828 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 PLCB1Q9NQ66 1216 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 ZKSCAN5Q9Y2L8 839 aa17.37■□□□□ 0.37
NUCKS1-201ENST00000367142 KIF3CO14782 793 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 STAM2O75886 525 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 MCF2L2Q86YR7 1114 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 RSAD2Q8WXG1 361 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 TRIM31Q9BZY9 425 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 LIG4P49917 911 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 ZNF594Q96JF6 807 aaPredicted RBP17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 ST7Q9NRC1 585 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 MRPL11Q9Y3B7 192 aaKnown RBP17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 MIS12Q9H081 205 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 ITKQ08881 620 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 AFAP1L1Q8TED9 768 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 RAB20Q9NX57 234 aa17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 FEZ2Q9UHY8 353 aaPredicted RBP17.36■□□□□ 0.37
NUCKS1-201ENST00000367142 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 VPS37BQ9H9H4 285 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGAP27Q6ZUM4 889 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 B4GALNT4Q76KP1 1039 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 P3H4Q92791 437 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 PCDHB13Q9Y5F0 798 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 TFAP4Q01664 338 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 BSPRYQ5W0U4 402 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 RUFY4Q6ZNE9 571 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms