RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 UBXN1Q04323 297 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 HLFQ16534 295 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 SPATA1Q5VX52 437 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 KIAA1328Q86T90 577 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 ZNF654Q8IZM8 581 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 CTAGE1Q96RT6 745 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
CD46-208ENST00000367042 MRC1P22897 1456 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 MYO1BO43795 1136 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 ABL1P00519 1130 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 MCM7P33993 719 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
CD46-208ENST00000367042 VSNL1P62760 191 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 NR1I3Q14994 352 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 RSRC2Q7L4I2 434 aaKnown RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 FBXL16Q8N461 479 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 ZBTB38Q8NAP3 1195 aaPredicted RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 SPATA5Q8NB90 893 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 FANCBQ8NB91 859 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 BAZ2BQ9UIF8 2168 aaKnown RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 MYO1CO00159 1063 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 PDE8BO95263 885 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 STARD3NLO95772 234 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 CD44P16070 742 aaKnown RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 TBX2Q13207 712 aaPredicted RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 UBE3CQ15386 1083 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 LCORLQ8N3X6 602 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 CCDC148Q8NFR7 591 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 TTLL11Q8NHH1 800 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 FEZ2Q9UHY8 353 aaPredicted RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 LCMT1Q9UIC8 334 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 TFR2Q9UP52 801 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 MFAP3LO75121 409 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 UQCRFS1P1P0C7P4 283 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 SLC5A1P13866 664 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 ZNF18P17022 549 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 KRT2P35908 639 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 DRC1Q96MC2 740 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 TSPYL1Q9H0U9 437 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 TRIM10Q9UDY6 481 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
CD46-208ENST00000367042 SRPRBQ9Y5M8 271 aaKnown RBP9.26□□□□□ -0.93
CD46-208ENST00000367042 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 POTEB2H3BUK9 544 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 PCCAP05165 728 aaPredicted RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 CYP7A1P22680 504 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 MATR3P43243 847 aaKnown RBP eCLIP9.25□□□□□ -0.935e-7■■■■■ 27
CD46-208ENST00000367042 EIF5P55010 431 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 CTSWP56202 376 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 NLRP5P59047 1200 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 CRACR2BQ8N4Y2 399 aaPredicted RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 GOLGA5Q8TBA6 731 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 PAGE5Q96GU1 130 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 PANX2Q96RD6 677 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 GBP3Q9H0R5 595 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 FOXP1Q9H334 677 aaPredicted RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 ABCC6O95255 1503 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 A0A1B0GTH6 734 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 SRGAP2O75044 1071 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 ACTN2P35609 894 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 LIFRP42702 1097 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CASP8Q14790 479 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 IFIT1BQ5T764 474 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 PIK3AP1Q6ZUJ8 805 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 TRIML1Q8N9V2 468 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 NOA1Q8NC60 698 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 EXOC4Q96A65 974 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 ANKZF1Q9H8Y5 726 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 JADE2Q9NQC1 790 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 HDAC6Q9UBN7 1215 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 TTF2Q9UNY4 1162 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 RRP15Q9Y3B9 282 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 RIPOR2Q9Y4F9 1068 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 TNKSO95271 1327 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 A0A087X0B3 334 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CYP2D7A0A087X1C5 515 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 BCAMP50895 628 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 RASGRF1Q13972 1273 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CCDC122Q5T0U0 273 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CATIPQ7Z7H3 387 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 SGMS1Q86VZ5 419 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 MED15Q96RN5 788 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
CD46-208ENST00000367042 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
CD46-208ENST00000367042 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms