RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 LTKP29376 864 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 IL12RB1P42701 662 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 SELENOPP49908 381 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 HAP1P54257 671 aaPredicted RBP1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 YBX1P67809 324 aaKnown RBP1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 MRPS21P82921 87 aaKnown RBP1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 EGR3Q06889 387 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 DPYDQ12882 1025 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 CDSNQ15517 529 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 CCDC142Q17RM4 750 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 BORAQ6PGQ7 559 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 ARMCX6Q7L4S7 300 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 TMC6Q7Z403 805 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 LDHDQ86WU2 507 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 IGDCC3Q8IVU1 814 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 SNX29Q8TEQ0 813 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 IKZF4Q9H2S9 585 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 CHRDQ9H2X0 955 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 SUSD2Q9UGT4 822 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 DUSP13Q9UII6 198 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 AMOTL2Q9Y2J4 779 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 TCAF1Q9Y4C2 921 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 DUSP10Q9Y6W6 482 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF536O15090 1300 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 SH3D21A4FU49 640 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 METTL12A8MUP2 240 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 IKBKBO14920 756 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 MUSKO15146 869 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF862O60290 1169 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 NOBOXO60393 691 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 LGR5O75473 907 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF202O95125 648 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 CBX7O95931 251 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 MPOP05164 745 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 GSTP1P09211 210 aaKnown RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 CDK4P11802 303 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 TPP2P29144 1249 aaPredicted RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 ARL4AP40617 200 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 PTK7Q13308 1070 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 SURF1Q15526 300 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 TARBP2Q15633 366 aaKnown RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 GPR162Q16538 588 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 TBC1D10BQ4KMP7 808 aaPredicted RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 VWA3BQ502W6 1294 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 NLRX1Q86UT6 975 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAM124AQ86V42 546 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 CCNJLQ8IV13 435 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 ANKMY2Q8IV38 441 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 LGI4Q8N135 537 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 WDR89Q96FK6 387 aaPredicted RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 TRIM8Q9BZR9 551 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 DEF6Q9H4E7 631 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 LIN7BQ9HAP6 207 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 GPATCH2Q9NW75 528 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 STIM2Q9P246 746 aa1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZFR2Q9UPR6 939 aaKnown RBP1.14□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAM196BA6NMK8 535 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L15C9J2P7 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L10C9JJH3 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L13C9JLJ4 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L12C9JPN9 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L11C9JVI0 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L21D6R901 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L18D6R9N7 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L22D6RA61 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L17D6RBQ6 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L19D6RCP7 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L20D6RJB6 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 NPIPB8E9PQR5 432 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 TNFRSF10BO14763 440 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 EREGO14944 169 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 FANCGO15287 622 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 MSL3P1P0C860 447 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 PNLIPP16233 465 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 FBLN1P23142 703 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ERVFRD-1P60508 538 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 EHHADHQ08426 723 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 KIAA2012Q0VF49 1180 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP17L24Q0WX57 530 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 SLC14A2Q15849 920 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 KRTAP15-1Q3LI76 137 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 C8orf34Q49A92 452 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZC3H12AQ5D1E8 599 aaKnown RBP1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZKSCAN2Q63HK3 967 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 SAPCD2Q86UD0 394 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 SIRT2Q8IXJ6 389 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 PALM2Q8IXS6 379 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 CARFQ8N187 725 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 MFSD2AQ8NA29 543 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ACSBG1Q96GR2 724 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 MIPEPQ99797 713 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZC3H12CQ9C0D7 883 aaKnown RBP1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF576Q9H609 170 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAN1Q9Y2M0 1017 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 PCDHA5Q9Y5H7 936 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 PMF1-BGLAPU3KQ54 211 aa1.13□□□□□ -2.23
RNU6-54P-201ENST00000365563 A0A0A6YYK5 440 aaPredicted RBP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 A0A1B0GTL3 188 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 NRDCO43847 1150 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms