RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PRR36Q9H6K5 1346 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 CLCQ05315 142 aa7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 APOBRQ0VD83 1088 aa7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 GK5Q6ZS86 529 aa7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 BAHD1Q8TBE0 780 aaPredicted RBP7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 MAPK8IP1Q9UQF2 711 aa7.73□□□□□ -1.17
RNU4-28P-201ENST00000364739 TMEM265A0A087WTH1 108 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 SCAMP3O14828 347 aaKnown RBP7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 VAMP1P23763 118 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 METTL16Q86W50 562 aaKnown RBP7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 DNAJB8Q8NHS0 232 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 NKD1Q969G9 470 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 HRASLS5Q96KN8 279 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 TNKS2Q9H2K2 1166 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 ANTXR1Q9H6X2 564 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 METTL5Q9NRN9 209 aaKnown RBP7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 VAV3Q9UKW4 847 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 CEP131Q9UPN4 1083 aa7.72□□□□□ -1.17
RNU4-28P-201ENST00000364739 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.17
RNU4-28P-201ENST00000364739 SLC22A31A6NKX4 558 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 HDLBPQ00341 1268 aaKnown RBP7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 PRKCQQ04759 706 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 FBXL18Q96ME1 805 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 HSPA12BQ96MM6 686 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 KIF2CQ99661 725 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 LRRC3Q9BY71 257 aa7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 DDX41Q9UJV9 622 aaKnown RBP7.71□□□□□ -1.18
RNU4-28P-201ENST00000364739 WASH4PA8MWX3 477 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 LRRN2O75325 713 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 PHACTR4Q8IZ21 702 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 MFSD4AQ8N468 514 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 CYB5D2Q8WUJ1 264 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 PRDM7Q9NQW5 492 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 PODXL2Q9NZ53 605 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 CAPN6Q9Y6Q1 641 aa7.7□□□□□ -1.18
RNU4-28P-201ENST00000364739 H3BS24 57 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 TNNI2P48788 182 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 TNK2Q07912 1038 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 FZD5Q13467 585 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 LCE1DQ5T752 114 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 NT5DC4Q86YG4 428 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 SLFN12Q8IYM2 578 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 STK11IPQ8N1F8 1099 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 Q96M66 194 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 ADGRE2Q9UHX3 823 aa7.69□□□□□ -1.18
RNU4-28P-201ENST00000364739 ATE1O95260 518 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZNF865P0CJ78 1059 aaPredicted RBP7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 POLR2BP30876 1174 aaKnown RBP7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 SLITRK4Q8IW52 837 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 SEMA3GQ9NS98 782 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 SNX11Q9Y5W9 270 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
RNU4-28P-201ENST00000364739 CYP7A1P22680 504 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 ETV3P41162 512 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 IKZF1Q13422 519 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 OVOS1Q6IE37 1185 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 UBE2FQ969M7 185 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 CCDC74BQ96LY2 380 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 ADAMTS6Q9UKP5 1117 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 PITPNM2Q9BZ72 1349 aa7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 ARID1BQ8NFD5 2236 aaPredicted RBP7.67□□□□□ -1.18
RNU4-28P-201ENST00000364739 GBP1P32455 592 aa7.66□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZNF165P49910 485 aa7.66□□□□□ -1.18
RNU4-28P-201ENST00000364739 ASB11Q8WXH4 323 aa7.66□□□□□ -1.18
RNU4-28P-201ENST00000364739 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
RNU4-28P-201ENST00000364739 FAM86C2PA6NEL3 165 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 UBOX5O94941 541 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 RAG1P15918 1043 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 FUT4P22083 530 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 CLCN7P51798 805 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 PAK2Q13177 524 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 MLECQ14165 292 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZNF792Q3KQV3 632 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 C22orf34Q6ZV56 151 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 ZNF654Q8IZM8 581 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 AGBL5Q8NDL9 886 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 PI4K2BQ8TCG2 481 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 KREMEN1Q96MU8 473 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 KRTAP4-7Q9BYR0 210 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 GMIPQ9P107 970 aa7.65□□□□□ -1.18
RNU4-28P-201ENST00000364739 RGS13O14921 159 aa7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 RBM25P49756 843 aaKnown RBP7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 ZP2Q05996 745 aa7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 FBXW10Q5XX13 1052 aa7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 PPT2Q9UMR5 302 aa7.64□□□□□ -1.19
RNU4-28P-201ENST00000364739 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms