RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 BCRP11274 1271 aa20.2■□□□□ 0.82
CKLF-204ENST00000362093 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
CKLF-204ENST00000362093 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
CKLF-204ENST00000362093 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
CKLF-204ENST00000362093 SIAH1Q8IUQ4 282 aa20.2■□□□□ 0.82
CKLF-204ENST00000362093 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
CKLF-204ENST00000362093 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 GSPT1P15170 499 aaKnown RBP20.19■□□□□ 0.82
CKLF-204ENST00000362093 RASA1P20936 1047 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 OSBPP22059 807 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 LACTBP83111 547 aaPredicted RBP20.19■□□□□ 0.82
CKLF-204ENST00000362093 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.829e-11■■□□□ 12.1
CKLF-204ENST00000362093 ALX1Q15699 326 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 OTOP1Q7RTM1 612 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
CKLF-204ENST00000362093 NAPBQ9H115 298 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
CKLF-204ENST00000362093 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
CKLF-204ENST00000362093 USP14P54578 494 aa20.18■□□□□ 0.82
CKLF-204ENST00000362093 STK11IPQ8N1F8 1099 aa20.18■□□□□ 0.82
CKLF-204ENST00000362093 ASCC2Q9H1I8 757 aaPredicted RBP20.18■□□□□ 0.82
CKLF-204ENST00000362093 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
CKLF-204ENST00000362093 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
CKLF-204ENST00000362093 HIP1O00291 1037 aa20.17■□□□□ 0.82
CKLF-204ENST00000362093 PPARAQ07869 468 aa20.17■□□□□ 0.82
CKLF-204ENST00000362093 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
CKLF-204ENST00000362093 FBXO46Q6PJ61 603 aaPredicted RBP20.17■□□□□ 0.82
CKLF-204ENST00000362093 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
CKLF-204ENST00000362093 FEZ1Q99689 392 aa20.17■□□□□ 0.82
CKLF-204ENST00000362093 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.17■□□□□ 0.82
CKLF-204ENST00000362093 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
CKLF-204ENST00000362093 HSPD1P10809 573 aaKnown RBP20.16■□□□□ 0.82
CKLF-204ENST00000362093 CTGFP29279 349 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 KIF22Q14807 665 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 ZYXQ15942 572 aaKnown RBP20.16■□□□□ 0.82
CKLF-204ENST00000362093 SMCR8Q8TEV9 937 aaPredicted RBP20.16■□□□□ 0.82
CKLF-204ENST00000362093 KANSL2Q9H9L4 492 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 ZNF287Q9HBT7 754 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 PTPN22Q9Y2R2 807 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
CKLF-204ENST00000362093 FGAP02671 866 aa20.15■□□□□ 0.82
CKLF-204ENST00000362093 GCLCP48506 637 aaPredicted RBP20.15■□□□□ 0.82
CKLF-204ENST00000362093 CWC27Q6UX04 472 aaKnown RBP20.15■□□□□ 0.82
CKLF-204ENST00000362093 CLEC10AQ8IUN9 316 aa20.15■□□□□ 0.82
CKLF-204ENST00000362093 ZNF444Q8N0Y2 327 aaPredicted RBP20.15■□□□□ 0.82
CKLF-204ENST00000362093 P2RX7Q99572 595 aaKnown RBP20.15■□□□□ 0.82
CKLF-204ENST00000362093 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
CKLF-204ENST00000362093 ANAPC4Q9UJX5 808 aa20.15■□□□□ 0.82
CKLF-204ENST00000362093 TMX2Q9Y320 296 aa20.15■□□□□ 0.82
CKLF-204ENST00000362093 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
CKLF-204ENST00000362093 PSMC4P43686 418 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 MFAP1P55081 439 aaKnown RBP20.14■□□□□ 0.81
CKLF-204ENST00000362093 IRX3P78415 501 aaPredicted RBP20.14■□□□□ 0.81
CKLF-204ENST00000362093 ICA1Q05084 483 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 PDE4BQ07343 736 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 CATSPERGQ6ZRH7 1159 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 ANKRD13CQ8N6S4 541 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 ARHGEF10LQ9HCE6 1279 aa20.14■□□□□ 0.81
CKLF-204ENST00000362093 USP17L15C9J2P7 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L13C9JLJ4 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L11C9JVI0 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L18D6R9N7 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L22D6RA61 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L17D6RBQ6 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L19D6RCP7 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L20D6RJB6 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 PRDM1O75626 825 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 GNRH1P01148 92 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 EEF2P13639 858 aaKnown RBP20.13■□□□□ 0.81
CKLF-204ENST00000362093 VCAM1P19320 739 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 USP17L24Q0WX57 530 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 KIAA1755Q5JYT7 1200 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 HPS5Q9UPZ3 1129 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 TACC3Q9Y6A5 838 aa20.13■□□□□ 0.81
CKLF-204ENST00000362093 MYH8P13535 1937 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 CTDSPL2Q05D32 466 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 FAM110CQ1W6H9 321 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 POTEEQ6S8J3 1075 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 INCENPQ9NQS7 918 aa20.12■□□□□ 0.81
CKLF-204ENST00000362093 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
CKLF-204ENST00000362093 ZMYM6O95789 1325 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 FGRP09769 529 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 HERVK_113P62684 666 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
CKLF-204ENST00000362093 VCPKMTQ9H867 229 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
CKLF-204ENST00000362093 FMNL1O95466 1100 aaPredicted RBP20.1■□□□□ 0.81
CKLF-204ENST00000362093 CHMLP26374 656 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 HOXD10P28358 340 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 NEDD1Q8NHV4 660 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 LPAR1Q92633 364 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 IL25Q9H293 177 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 SH2D4AQ9H788 454 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 TXNRD2Q9NNW7 524 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 RBPJLQ9UBG7 517 aa20.1■□□□□ 0.81
CKLF-204ENST00000362093 CCDC85CA6NKD9 419 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms