RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
SNX6-201ENST00000362031 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
SNX6-201ENST00000362031 MYL10Q9BUA6 226 aa12.67□□□□□ -0.38
SNX6-201ENST00000362031 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
SNX6-201ENST00000362031 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
SNX6-201ENST00000362031 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
SNX6-201ENST00000362031 RXRAP19793 462 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 ECE1P42892 770 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 DGKZQ13574 1117 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 VGLL4Q14135 290 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 TCP11L1Q9NUJ3 509 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 WDR19Q8NEZ3 1342 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 PASKQ96RG2 1323 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
SNX6-201ENST00000362031 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
SNX6-201ENST00000362031 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 KIAA1755Q5JYT7 1200 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 FBXL16Q8N461 479 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 ALDH8A1Q9H2A2 487 aaPredicted RBP12.66□□□□□ -0.38
SNX6-201ENST00000362031 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
SNX6-201ENST00000362031 SLC4A3P48751 1232 aa12.65□□□□□ -0.38
SNX6-201ENST00000362031 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
SNX6-201ENST00000362031 ME3Q16798 604 aa12.65□□□□□ -0.38
SNX6-201ENST00000362031 TMEM179Q6ZVK1 233 aa12.65□□□□□ -0.38
SNX6-201ENST00000362031 IQCA1Q86XH1 822 aa12.65□□□□□ -0.38
SNX6-201ENST00000362031 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
SNX6-201ENST00000362031 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
SNX6-201ENST00000362031 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
SNX6-201ENST00000362031 PTPRAP18433 802 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 LIFRP42702 1097 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 WTAPQ15007 396 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 SCYL3Q8IZE3 742 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 TOMM70O94826 608 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 FGD1P98174 961 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 ICA1Q05084 483 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 STK3Q13188 491 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 LDLRAD1Q5T700 205 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
SNX6-201ENST00000362031 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
SNX6-201ENST00000362031 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 ASNSP08243 561 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
SNX6-201ENST00000362031 NF2P35240 595 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 EVCP57679 992 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 TROAPQ12815 778 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 ELP3Q9H9T3 547 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 NCOA5Q9HCD5 579 aaKnown RBP12.63□□□□□ -0.39
SNX6-201ENST00000362031 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
SNX6-201ENST00000362031 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 PHIPQ8WWQ0 1821 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
SNX6-201ENST00000362031 ST18O60284 1047 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 TTLL1O95922 423 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 GJA5P36382 358 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 NOL9Q5SY16 702 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 SNX21Q969T3 373 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 CDC27P30260 824 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 MKL1Q969V6 931 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 MTA3Q9BTC8 594 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
SNX6-201ENST00000362031 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
SNX6-201ENST00000362031 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 BAZ2BQ9UIF8 2168 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms