RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-202ENST00000359082 SORBS3O60504 671 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 KRT15P19012 456 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 KMT5BQ4FZB7 885 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 BSPRYQ5W0U4 402 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 TYW1BQ6NUM6 668 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 SLF1Q9BQI6 1058 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 DKC1O60832 514 aaKnown RBP eCLIP20.37■□□□□ 0.85
SHANK1-202ENST00000359082 NPATQ14207 1427 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 BCRP11274 1271 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 SYCE1Q8N0S2 351 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 CCDC24Q8N4L8 307 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 FAM114A2Q9NRY5 505 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-202ENST00000359082 IVNS1ABPQ9Y6Y0 642 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 TRMT44Q8IYL2 757 aaKnown RBP20.36■□□□□ 0.85
SHANK1-202ENST00000359082 SRGAP1Q7Z6B7 1085 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 STAMQ92783 540 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 POLR3AO14802 1390 aaPredicted RBP20.36■□□□□ 0.85
SHANK1-202ENST00000359082 CFBP00751 764 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 SLC1A4P43007 532 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 PNOCQ13519 176 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 SPOUT1Q5T280 376 aaKnown RBP20.36■□□□□ 0.85
SHANK1-202ENST00000359082 KRT25Q7Z3Z0 450 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 APPBP2Q92624 585 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 RDH13Q8NBN7 331 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 PLCB1Q9NQ66 1216 aa20.36■□□□□ 0.85
SHANK1-202ENST00000359082 YTHDC2Q9H6S0 1430 aaKnown RBP20.36■□□□□ 0.85
SHANK1-202ENST00000359082 LSM14BQ9BX40 385 aaKnown RBP20.36■□□□□ 0.85
SHANK1-202ENST00000359082 MAGEA1P43355 309 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 LONRF2Q1L5Z9 754 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 MAPKAPK5Q8IW41 473 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 GSDMBQ8TAX9 411 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 TGFBRAP1Q8WUH2 860 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 CLNS1AP54105 237 aaKnown RBP20.35■□□□□ 0.85
SHANK1-202ENST00000359082 PEX26Q7Z412 305 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 MLKLQ8NB16 471 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 ANO3Q9BYT9 981 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 GADD45BO75293 160 aaPredicted RBP20.35■□□□□ 0.85
SHANK1-202ENST00000359082 BIRC2Q13490 618 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 CDC37L1Q7L3B6 337 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 PRPF31Q8WWY3 499 aaKnown RBP20.35■□□□□ 0.85
SHANK1-202ENST00000359082 ABCC10Q5T3U5 1492 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 RPS6KA1Q15418 735 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 FAM47AQ5JRC9 791 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 ANKRD42Q8N9B4 389 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 RILPQ96NA2 401 aa20.35■□□□□ 0.85
SHANK1-202ENST00000359082 MAST3O60307 1309 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 ARID4AP29374 1257 aaPredicted RBP20.34■□□□□ 0.85
SHANK1-202ENST00000359082 DNM2P50570 870 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 TPH2Q8IWU9 490 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 ZFYVE9O95405 1425 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
SHANK1-202ENST00000359082 GCP02774 474 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 RUFY4Q6ZNE9 571 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 SPATA5Q8NB90 893 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 MED10Q9BTT4 135 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 M0QZ92 97 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 PAK2Q13177 524 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 LGSNQ5TDP6 509 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 DENND2CQ68D51 928 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
SHANK1-202ENST00000359082 RRAGAQ7L523 313 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 TMTC1Q8IUR5 882 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 CFAP221Q4G0U5 840 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 NSMFQ6X4W1 530 aa20.34■□□□□ 0.85
SHANK1-202ENST00000359082 TNNI1P19237 187 aa20.33■□□□□ 0.85
SHANK1-202ENST00000359082 RIOK1Q9BRS2 568 aaKnown RBP20.33■□□□□ 0.85
SHANK1-202ENST00000359082 SH2D4BQ5SQS7 431 aa20.33■□□□□ 0.85
SHANK1-202ENST00000359082 POTEDQ86YR6 584 aa20.33■□□□□ 0.85
SHANK1-202ENST00000359082 GLT8D2Q9H1C3 349 aa20.33■□□□□ 0.85
SHANK1-202ENST00000359082 IMPACTQ9P2X3 320 aa20.33■□□□□ 0.85
SHANK1-202ENST00000359082 FAM207AQ9NSI2 230 aaPredicted RBP20.33■□□□□ 0.84
SHANK1-202ENST00000359082 VPS54Q9P1Q0 977 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 GBP7Q8N8V2 638 aaPredicted RBP20.33■□□□□ 0.84
SHANK1-202ENST00000359082 TSNAXIP1Q2TAA8 658 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 PARP10Q53GL7 1025 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 FAM102BQ5T8I3 360 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 VCXQ9H320 206 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 STK38LQ9Y2H1 464 aa20.33■□□□□ 0.84
SHANK1-202ENST00000359082 ZNF532Q9HCE3 1301 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 FLOT1O75955 427 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 KRT40Q6A162 431 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 SND1Q7KZF4 910 aaKnown RBP eCLIP20.32■□□□□ 0.84
SHANK1-202ENST00000359082 SLC12A2P55011 1212 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 U2AF1L4Q8WU68 220 aaKnown RBP20.32■□□□□ 0.84
SHANK1-202ENST00000359082 NFE2L3Q9Y4A8 694 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 OAS2P29728 719 aaKnown RBP20.32■□□□□ 0.84
SHANK1-202ENST00000359082 PNMA8AQ86V59 439 aaPredicted RBP20.32■□□□□ 0.84
SHANK1-202ENST00000359082 NCKAP5LQ9HCH0 1330 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 RSAD2Q8WXG1 361 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 SUCLG2Q96I99 432 aa20.32■□□□□ 0.84
SHANK1-202ENST00000359082 CACYBPQ9HB71 228 aaKnown RBP20.32■□□□□ 0.84
SHANK1-202ENST00000359082 GUCY2FP51841 1108 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 GDAP1L1Q96MZ0 367 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 NLRC4Q9NPP4 1024 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms