RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 RBM43Q6ZSC3 357 aaKnown RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 TANGO6Q9C0B7 1094 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 SALL1Q9NSC2 1324 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 EVCP57679 992 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 KIF5CO60282 957 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
SSU72-202ENST00000359060 FERMT2Q96AC1 680 aa12.69□□□□□ -0.38
SSU72-202ENST00000359060 JCADQ9P266 1359 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 GGA1Q9UJY5 639 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 MAN1B1Q9UKM7 699 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 FOXP2O15409 715 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 PTPREP23469 700 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 IGSF22Q8N9C0 903 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 CCDC94Q9BW85 323 aaPredicted RBP12.68□□□□□ -0.38
SSU72-202ENST00000359060 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 IKBKBO14920 756 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 IGSF3O75054 1194 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 KLRK1P26718 216 aa12.68□□□□□ -0.38
SSU72-202ENST00000359060 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
SSU72-202ENST00000359060 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
SSU72-202ENST00000359060 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 ASIC1P78348 528 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 GRIN1Q05586 938 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 ELF2Q15723 593 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 USP49Q70CQ1 688 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 ZNF622Q969S3 477 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSU72-202ENST00000359060 PKNOX2Q96KN3 472 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 CTAGE1Q96RT6 745 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 SAMSN1Q9NSI8 373 aaKnown RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 RMND1Q9NWS8 449 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 NAA30Q147X3 362 aaPredicted RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 INF2Q27J81 1249 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 JAKMIP3Q5VZ66 844 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 ADGRA1Q86SQ6 560 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
SSU72-202ENST00000359060 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
SSU72-202ENST00000359060 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 DDAH1O94760 285 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 SPECC1LQ69YQ0 1117 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 TMCO3Q6UWJ1 677 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
SSU72-202ENST00000359060 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 ZBTB9Q96C00 473 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
SSU72-202ENST00000359060 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 MRC1P22897 1456 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 AKR1B15C9JRZ8 316 aaPredicted RBP12.66□□□□□ -0.38
SSU72-202ENST00000359060 SEMA3EO15041 775 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 CAGE1Q8TC20 777 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 TMEM232C9JQI7 657 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
SSU72-202ENST00000359060 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 TNNI2P48788 182 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 GTF2IP78347 998 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 NTRK3Q16288 839 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
SSU72-202ENST00000359060 EYA3Q99504 573 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 EXOC1Q9NV70 894 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 TAB2Q9NYJ8 693 aa12.66□□□□□ -0.38
SSU72-202ENST00000359060 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 PSMA7O14818 248 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 CCDC175P0C221 793 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 PLCG2P16885 1265 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms