RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 GOLGA1Q92805 767 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 TSG101Q99816 390 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.2
COL20A1-201ENST00000358894 PPP2R3AQ06190 1150 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 ZNF804AQ7Z570 1209 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 GIMAP7Q8NHV1 300 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 LUC7L2Q9Y383 392 aaKnown RBP13.83□□□□□ -0.2
COL20A1-201ENST00000358894 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
COL20A1-201ENST00000358894 USP27XA6NNY8 438 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
COL20A1-201ENST00000358894 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
COL20A1-201ENST00000358894 MMRN2Q9H8L6 949 aa13.83□□□□□ -0.2
COL20A1-201ENST00000358894 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 AP5Z1O43299 807 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 MMP1P03956 469 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 PTGDRQ13258 359 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 PPP1R13BQ96KQ4 1090 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 CAPZA3Q96KX2 299 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 RIPOR2Q9Y4F9 1068 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 FDPSP14324 419 aaKnown RBP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 KRT9P35527 623 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 LIFRP42702 1097 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 TGFBRAP1Q8WUH2 860 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 PAK1Q13153 545 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 SPTLC3Q9NUV7 552 aa13.82□□□□□ -0.2
COL20A1-201ENST00000358894 SEPT11Q9NVA2 429 aaKnown RBP13.82□□□□□ -0.2
COL20A1-201ENST00000358894 MEGF6O75095 1541 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 CDC25AP30304 524 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 IQCEQ6IPM2 695 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
COL20A1-201ENST00000358894 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
COL20A1-201ENST00000358894 MYO1BO43795 1136 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 CAPN2P17655 700 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-201ENST00000358894 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-201ENST00000358894 CYLC1P35663 651 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-201ENST00000358894 CDR1P51861 262 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 IQCB1Q15051 598 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 PPP2R2CQ9Y2T4 447 aa13.81□□□□□ -0.2
COL20A1-201ENST00000358894 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 UFL1O94874 794 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 CTR9Q6PD62 1173 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 IKBKBO14920 756 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 ARID4AP29374 1257 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 ANTXR2P58335 489 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 RASGRP4Q8TDF6 673 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 EPSTI1Q96J88 318 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 SAMSN1Q9NSI8 373 aaKnown RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 LMTK3Q96Q04 1460 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 GNA11P29992 359 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 PDE4DQ08499 809 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
COL20A1-201ENST00000358894 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 MAN1B1Q9UKM7 699 aa13.8□□□□□ -0.2
COL20A1-201ENST00000358894 CCNT1O60563 726 aaKnown RBP13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CASP1P29466 404 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 TXKP42681 527 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 ST5P78524 1137 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-201ENST00000358894 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 NELFBQ8WX92 580 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 SCG2P13521 617 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 PAFAH1B1P43034 410 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 ARID5AQ03989 594 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-201ENST00000358894 FOXN1O15353 648 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CSGALNACT2Q8N6G5 542 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 C3P01024 1663 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms