RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 ATF7IPQ6VMQ6 1270 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 GPR142Q7Z601 462 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 MAPKAPK5Q8IW41 473 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 DEFB123Q8N688 67 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 MTMR10Q9NXD2 777 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 ZBTB21Q9ULJ3 1066 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 CDH23Q9H251 3354 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 PRUNE2Q8WUY3 3088 aa10.52□□□□□ -0.73
COL4A3BP-202ENST00000357457 GDF11O95390 407 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 ATP8B2P98198 1209 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 PDE3AQ14432 1141 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 CCL14Q16627 93 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 TATDN1Q6P1N9 297 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 SSH3Q8TE77 659 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 DBNDD2Q9BQY9 259 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 STXBP5LQ9Y2K9 1186 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
COL4A3BP-202ENST00000357457 MAST2Q6P0Q8 1798 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 CNMDO75829 334 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 IGHA2P01877 340 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 HLA-DOAP06340 250 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 LBX2Q6XYB7 198 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 Q7L0L9 218 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 EDC3Q96F86 508 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 APBA2Q99767 749 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 UBE2OQ9C0C9 1292 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 TNNQ9UQP3 1299 aa10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 NOP58Q9Y2X3 529 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-202ENST00000357457 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 BCAR3O75815 825 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 GH2P01242 217 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 HOXC6P09630 235 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 ZAP70P43403 619 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 DYNLL1P63167 89 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 FAM109BQ6ICB4 259 aaPredicted RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 TMED8Q6PL24 325 aaPredicted RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 CERS3Q8IU89 383 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 CCAR1Q8IX12 1150 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 PAGR1Q9BTK6 254 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 EHD4Q9H223 541 aa10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 SAP30BPQ9UHR5 308 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-202ENST00000357457 SPTBN5Q9NRC6 3674 aaKnown RBP10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 SLC15A5A6NIM6 579 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 CYP7A1P22680 504 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 PTPREP23469 700 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 USP14P54578 494 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 CCNA1P78396 465 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 TMEM57Q8N5G2 664 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 KIAA1683Q9H0B3 1180 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 DBNLQ9UJU6 430 aaKnown RBP10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 SMCHD1A6NHR9 2005 aa10.48□□□□□ -0.73
COL4A3BP-202ENST00000357457 ZNFX1Q9P2E3 1918 aaKnown RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 MSCO60682 206 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 GRB14Q14449 540 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 MFSD14CQ5VZR4 134 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 LPAR1Q92633 364 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 FRAT1Q92837 279 aaPredicted RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 EAF2Q96CJ1 260 aaPredicted RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 BTBD7Q9P203 1132 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 SERPINB13Q9UIV8 391 aa10.47□□□□□ -0.73
COL4A3BP-202ENST00000357457 RLFQ13129 1914 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 VCAM1P19320 739 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 GUCY1A2P33402 732 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 SHMT1P34896 483 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 PLCD1P51178 756 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms