RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZC3H4Q9UPT8 1303 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 PPFIA3O75145 1194 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 TNFAIP1Q13829 316 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 CERKLQ49MI3 558 aaPredicted RBP21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 ANGEL2Q5VTE6 544 aaKnown RBP21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 CATIPQ7Z7H3 387 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 TNPO1Q92973 898 aaKnown RBP21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 DDX11Q96FC9 970 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 L3MBTL3Q96JM7 780 aaPredicted RBP21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 CCDC17Q96LX7 622 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 TMEM47Q9BQJ4 181 aa21.2■□□□□ 0.98
SMARCD3-202ENST00000356800 DHX16O60231 1041 aaKnown RBP21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 LMOD1P29536 600 aaPredicted RBP21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 NTRK3Q16288 839 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 DPY19L2Q6NUT2 758 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 CLEC10AQ8IUN9 316 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 FANCBQ8NB91 859 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 ADARB2Q9NS39 739 aaKnown RBP21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
SMARCD3-202ENST00000356800 DDAH1O94760 285 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 PDIA4P13667 645 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 FDPSP14324 419 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 SYT1P21579 422 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 JAG1P78504 1218 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 RTN1Q16799 776 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 CLEC17AQ6ZS10 378 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 DEFB129Q9H1M3 183 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 KAT14Q9H8E8 782 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 TBC1D12O60347 775 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 BRD1O95696 1058 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 MAP3K10Q02779 954 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 PNMA1Q8ND90 353 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 GGA3Q9NZ52 723 aa21.18■□□□□ 0.98
SMARCD3-202ENST00000356800 GLTPD2A6NH11 291 aa21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 MPHOSPH10O00566 681 aaKnown RBP21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 CPLX1O14810 134 aa21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 GDF11O95390 407 aa21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 GUCY1A2P33402 732 aa21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 MIGA2Q7L4E1 593 aa21.17■□□□□ 0.98
SMARCD3-202ENST00000356800 CALM1P0DP23 149 aa21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 CALM2P0DP24 149 aa21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 CALM3P0DP25 149 aa21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 HMGN5P82970 282 aaKnown RBP21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 APOBEC3FQ8IUX4 373 aaKnown RBP21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 SCN4AP35499 1836 aa21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 MYH6P13533 1939 aa21.16■□□□□ 0.98
SMARCD3-202ENST00000356800 TOP1P11387 765 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 ABCB5Q2M3G0 1257 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 ATAD5Q96QE3 1844 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 WDR33Q9C0J8 1336 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 STX6O43752 255 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 SEPT2Q15019 361 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 PPP2R5BQ15173 497 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 CMTR1Q8N1G2 835 aaKnown RBP21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 PHKBQ93100 1093 aa21.15■□□□□ 0.98
SMARCD3-202ENST00000356800 CCDC196A0A1B0GTZ2 297 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 TTLL1O95922 423 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 IFNAR1P17181 557 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 PDCP20941 246 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 NBPF12Q5TAG4 269 aaPredicted RBP21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 LARP1BQ659C4 914 aaKnown RBP21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 TMEM179Q6ZVK1 233 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 NBPF11Q86T75 865 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 GBP4Q96PP9 640 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 ORC3Q9UBD5 711 aaPredicted RBP21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 CLIP2Q9UDT6 1046 aa21.14■□□□□ 0.97
SMARCD3-202ENST00000356800 WDR90Q96KV7 1748 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 PITPNM2Q9BZ72 1349 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 CDKL5O76039 1030 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 PLEKHA8P1O95397 391 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 GH2P01242 217 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 FUT2Q10981 343 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 FOXD4L5Q5VV16 416 aaPredicted RBP21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 RASGRP2Q7LDG7 609 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 SIAH1Q8IUQ4 282 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 FOXD4L4Q8WXT5 416 aaPredicted RBP21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 MAP3K14Q99558 947 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 ANP32EQ9BTT0 268 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 MTMR6Q9Y217 621 aa21.13■□□□□ 0.97
SMARCD3-202ENST00000356800 POTECB2RU33 542 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 MCM4P33991 863 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 NBR1Q14596 966 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 GRM4Q14833 912 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 PRAMEF18Q5VWM3 479 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 LRRC47Q8N1G4 583 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 FAM184AQ8NB25 1140 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 CTCFLQ8NI51 663 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 KANSL2Q9H9L4 492 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 RBM28Q9NW13 759 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 BAZ2BQ9UIF8 2168 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 PHF20L1A8MW92 1017 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 UBE2Q2LH0YL09 131 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 EPHX2P34913 555 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 CCDC82Q8N4S0 544 aa21.12■□□□□ 0.97
SMARCD3-202ENST00000356800 STK36Q9NRP7 1315 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms