RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZNF215Q9UL58 517 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 KLHL30Q0D2K2 578 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 ARHGAP44Q17R89 818 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 GABPB2Q8TAK5 448 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 FAM71BQ8TC56 605 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 LSM14BQ9BX40 385 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 SAR1BQ9Y6B6 198 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 KCNK3O14649 394 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 ZNF202O95125 648 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 BRD3Q15059 726 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 NCAPH2Q6IBW4 605 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 BRD1O95696 1058 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 SAT1P21673 171 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 RFC4P35249 363 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 TXKP42681 527 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 IFIH1Q9BYX4 1025 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 MRFAP1Q9Y605 127 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-201ENST00000356183 TRPA1O75762 1119 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 STRN3Q13033 797 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 RCN2Q14257 317 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 POSTNQ15063 836 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 NELFCDQ8IXH7 590 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 TEX11Q8IYF3 940 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 P3H4Q92791 437 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 RRP15Q9Y3B9 282 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 SLC8A3P57103 927 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 TAB3Q8N5C8 712 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 XAGE3Q8WTP9 111 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 NCOA5Q9HCD5 579 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 GRM8O00222 908 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 KRIT1O00522 736 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 GNAT2P19087 354 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 IFT88Q13099 833 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 GCNT3O95395 438 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 PPP2R5AQ15172 486 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 KCTD16Q68DU8 428 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 PHBP35232 272 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 TRAF1Q13077 416 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 NBPF5PQ86XG9 351 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 THEGQ9P2T0 379 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 PPP1R12AO14974 1030 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 ADCY8P40145 1251 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 N4BP2L2Q92802 583 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
GTF3C1-201ENST00000356183 B4E1Z4 1266 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 PPP1R2P41236 205 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 FAM133BQ5BKY9 247 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 SMTNP53814 917 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 LMBR1LQ6UX01 489 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 ZBBXA8MT70 800 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 SLC27A2O14975 620 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 THAP12O43422 761 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 ZNF804AQ7Z570 1209 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 PIP4K2CQ8TBX8 421 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 FAM207AQ9NSI2 230 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 FBLN1P23142 703 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 HP1BP3Q5SSJ5 553 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 DCLK2Q8N568 766 aa12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 JPH2Q9BR39 696 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD20A4Q4UJ75 823 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ZC4H2Q9NQZ6 224 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 DNAJC8O75937 253 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 GSTA1P08263 222 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 KRT19P08727 400 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 GSTA2P09210 222 aa12.15□□□□□ -0.46
GTF3C1-201ENST00000356183 ABCB4P21439 1286 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms