RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.01
NCDN-201ENST00000356090 SPATA1Q5VX52 437 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 UBXN1Q04323 297 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 HDXQ7Z353 690 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
NCDN-201ENST00000356090 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 RSPH14Q9UHP6 348 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 TFR2Q9UP52 801 aa15.13■□□□□ 0.01
NCDN-201ENST00000356090 TRIM66O15016 1216 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 NR1I3Q14994 352 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 NOM1Q5C9Z4 860 aaKnown RBP15.12■□□□□ 0.01
NCDN-201ENST00000356090 PNKPQ96T60 521 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 RABEP2Q9H5N1 569 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 C5P01031 1676 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 CCDC151A5D8V7 595 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 KRT2P35908 639 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 NLRP5P59047 1200 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
NCDN-201ENST00000356090 PUM3Q15397 648 aaKnown RBP15.12■□□□□ 0.01
NCDN-201ENST00000356090 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 MED15Q96RN5 788 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
NCDN-201ENST00000356090 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
NCDN-201ENST00000356090 TNKSO95271 1327 aa15.12■□□□□ 0.01
NCDN-201ENST00000356090 ZNF18P17022 549 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 MDM2Q00987 491 aaPredicted RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 PIK3AP1Q6ZUJ8 805 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 A0A087X0B3 334 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 ACTN4O43707 911 aaKnown RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 LIFRP42702 1097 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 FKBP15Q5T1M5 1219 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 KIAA1328Q86T90 577 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 SGMS1Q86VZ5 419 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 DRC1Q96MC2 740 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 FOXP1Q9H334 677 aaPredicted RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 TRIM10Q9UDY6 481 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 GSG1L2A8MUP6 293 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 EARS2Q5JPH6 523 aaKnown RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 RSRC2Q7L4I2 434 aaKnown RBP15.11■□□□□ 0.01
NCDN-201ENST00000356090 CATIPQ7Z7H3 387 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 LPIN2Q92539 896 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
NCDN-201ENST00000356090 MYO1BO43795 1136 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 MFAP3LO75121 409 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 IPO7O95373 1038 aaKnown RBP15.1■□□□□ 0.01
NCDN-201ENST00000356090 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 PTGDRQ13258 359 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 BRD3Q15059 726 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
NCDN-201ENST00000356090 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 EIF5P55010 431 aaKnown RBP15.1■□□□□ 0.01
NCDN-201ENST00000356090 VSNL1P62760 191 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 ESR2Q92731 530 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
NCDN-201ENST00000356090 WDR19Q8NEZ3 1342 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 ERCC5P28715 1186 aaPredicted RBP15.1■□□□□ 0.01
NCDN-201ENST00000356090 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
NCDN-201ENST00000356090 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 TACC3Q9Y6A5 838 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 ABCC6O95255 1503 aa15.1■□□□□ 0.01
NCDN-201ENST00000356090 ERCC3P19447 782 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 PPARAQ07869 468 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 TTC38Q5R3I4 469 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 DZIP3Q86Y13 1208 aaKnown RBP15.09■□□□□ 0.01
NCDN-201ENST00000356090 TRIML1Q8N9V2 468 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 ATP8B1O43520 1251 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 SRGAP2O75044 1071 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 KRT31Q15323 416 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 NOA1Q8NC60 698 aaKnown RBP15.09■□□□□ 0.01
NCDN-201ENST00000356090 PANX2Q96RD6 677 aa15.09■□□□□ 0.01
NCDN-201ENST00000356090 GYPCP04921 128 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 CCDC148Q8NFR7 591 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 NELFBQ8WX92 580 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 LCMT1Q9UIC8 334 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 GDAQ9Y2T3 454 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 RGPD5Q99666 1765 aa15.08■□□□□ 0.01
NCDN-201ENST00000356090 MAP3K15Q6ZN16 1313 aa15.08■□□□□ 0
NCDN-201ENST00000356090 PDE8AO60658 829 aa15.08■□□□□ 0
NCDN-201ENST00000356090 DNA2P51530 1060 aa15.08■□□□□ 0
NCDN-201ENST00000356090 IQCA1Q86XH1 822 aa15.08■□□□□ 0
NCDN-201ENST00000356090 CHP1Q99653 195 aa15.08■□□□□ 0
NCDN-201ENST00000356090 RASSF4Q9H2L5 321 aa15.08■□□□□ 0
NCDN-201ENST00000356090 ACBD3Q9H3P7 528 aa15.08■□□□□ 0
NCDN-201ENST00000356090 FBXO3Q9UK99 471 aa15.08■□□□□ 0
NCDN-201ENST00000356090 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
NCDN-201ENST00000356090 WNT7AO00755 349 aa15.08■□□□□ 0
NCDN-201ENST00000356090 CSF1RP07333 972 aa15.08■□□□□ 0
NCDN-201ENST00000356090 MRPS25P82663 173 aaKnown RBP15.08■□□□□ 0
NCDN-201ENST00000356090 CCDC122Q5T0U0 273 aa15.08■□□□□ 0
NCDN-201ENST00000356090 TMTC2Q8N394 836 aa15.08■□□□□ 0
NCDN-201ENST00000356090 ANKZF1Q9H8Y5 726 aa15.08■□□□□ 0
NCDN-201ENST00000356090 JADE2Q9NQC1 790 aa15.08■□□□□ 0
NCDN-201ENST00000356090 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms