RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 CPLX2Q6PUV4 134 aaKnown RBP11.22□□□□□ -0.61
NPHP1-202ENST00000355301 TNPO1Q92973 898 aaKnown RBP11.22□□□□□ -0.61
NPHP1-202ENST00000355301 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
NPHP1-202ENST00000355301 ZC3H4Q9UPT8 1303 aaKnown RBP11.22□□□□□ -0.61
NPHP1-202ENST00000355301 DDNO94850 711 aaPredicted RBP11.21□□□□□ -0.61
NPHP1-202ENST00000355301 SLURP2P0DP57 97 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
NPHP1-202ENST00000355301 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 MAP3K14Q99558 947 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 STX8Q9UNK0 236 aa11.21□□□□□ -0.61
NPHP1-202ENST00000355301 FAM196BA6NMK8 535 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 TBC1D12O60347 775 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.62
NPHP1-202ENST00000355301 IFNAR1P17181 557 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 MAP3K10Q02779 954 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 RASA3Q14644 834 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 CERKLQ49MI3 558 aaPredicted RBP11.21□□□□□ -0.62
NPHP1-202ENST00000355301 FAM184AQ8NB25 1140 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 PNMA1Q8ND90 353 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 TMEM47Q9BQJ4 181 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 HACL1Q9UJ83 578 aa11.21□□□□□ -0.62
NPHP1-202ENST00000355301 EPS15P42566 896 aa11.2□□□□□ -0.62
NPHP1-202ENST00000355301 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
NPHP1-202ENST00000355301 CLEC17AQ6ZS10 378 aa11.2□□□□□ -0.62
NPHP1-202ENST00000355301 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
NPHP1-202ENST00000355301 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
NPHP1-202ENST00000355301 ASTN2O75129 1339 aaPredicted RBP11.2□□□□□ -0.62
NPHP1-202ENST00000355301 STK36Q9NRP7 1315 aa11.2□□□□□ -0.62
NPHP1-202ENST00000355301 TTLL1O95922 423 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 ZSCAN22P10073 491 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 CTCFLQ8NI51 663 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 TEPSINQ96N21 525 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 ORC3Q9UBD5 711 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 HIRAP54198 1017 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 TMEM179Q6ZVK1 233 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 PHKBQ93100 1093 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
NPHP1-202ENST00000355301 ADARB2Q9NS39 739 aaKnown RBP11.19□□□□□ -0.62
NPHP1-202ENST00000355301 FMNL1O95466 1100 aaPredicted RBP11.18□□□□□ -0.62
NPHP1-202ENST00000355301 KIF5BP33176 963 aa11.18□□□□□ -0.62
NPHP1-202ENST00000355301 FUT2Q10981 343 aa11.18□□□□□ -0.62
NPHP1-202ENST00000355301 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
NPHP1-202ENST00000355301 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
NPHP1-202ENST00000355301 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
NPHP1-202ENST00000355301 KANSL2Q9H9L4 492 aa11.18□□□□□ -0.62
NPHP1-202ENST00000355301 VPS37CA5D8V6 355 aaPredicted RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 SSRP1Q08945 709 aaKnown RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 RRP1BQ14684 758 aaKnown RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GRM4Q14833 912 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 TRIM22Q8IYM9 498 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 MKL1Q969V6 931 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GBP4Q96PP9 640 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 NYAP2Q9P242 653 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 H3BQV1 296 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GDF11O95390 407 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 F13A1P00488 732 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 CMTR1Q8N1G2 835 aaKnown RBP11.17□□□□□ -0.62
NPHP1-202ENST00000355301 SLC26A6Q9BXS9 759 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 CABP5Q9NP86 173 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 CLIP2Q9UDT6 1046 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 MAD2L2Q9UI95 211 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
NPHP1-202ENST00000355301 DEXIO95424 95 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 BAG4O95429 457 aaKnown RBP11.16□□□□□ -0.62
NPHP1-202ENST00000355301 GH2P01242 217 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms