RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 USP17L12C9JPN9 530 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 USP17L21D6R901 530 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 ACTN4O43707 911 aaKnown RBP14.68□□□□□ -0.06
SCN8A-202ENST00000355133 GYG1P46976 350 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 ARHGAP44Q17R89 818 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 MYO1AQ9UBC5 1043 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 CEP104O60308 925 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 PRPF6O94906 941 aaKnown RBP14.68□□□□□ -0.06
SCN8A-202ENST00000355133 GABPAQ06546 454 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 ARPP21Q9UBL0 812 aaPredicted RBP14.68□□□□□ -0.06
SCN8A-202ENST00000355133 ARHGEF10O15013 1369 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 M0QZ92 97 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 STK10O94804 968 aaKnown RBP14.68□□□□□ -0.06
SCN8A-202ENST00000355133 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCN8A-202ENST00000355133 PPP2R5BQ15173 497 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 HS1BP3Q53T59 392 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 GLG1Q92896 1179 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 PFDN4Q9NQP4 134 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 BCS1LQ9Y276 419 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 KLHL7Q8IXQ5 586 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 TEKT1Q969V4 418 aa14.68□□□□□ -0.06
SCN8A-202ENST00000355133 HSPA1LP34931 641 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 SCNN1DP51172 638 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ZNF75DP51815 510 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 PNOCQ13519 176 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ASIC3Q9UHC3 531 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 NLRX1Q86UT6 975 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 DSCC1Q9BVC3 393 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
SCN8A-202ENST00000355133 TCP10L2B9ZVM9 353 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 H7C1D1 291 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 GAS7O60861 476 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ATP5JP18859 108 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 TNNI1P19237 187 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ATP5DP30049 168 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 MAGEA1P43355 309 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 INTS8Q75QN2 995 aaKnown RBP14.67□□□□□ -0.06
SCN8A-202ENST00000355133 SERTAD1Q9UHV2 236 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ERVV-2B6SEH9 535 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ITIH3Q06033 890 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 MIER3Q7Z3K6 550 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 BCAMP50895 628 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 SPOUT1Q5T280 376 aaKnown RBP14.67□□□□□ -0.06
SCN8A-202ENST00000355133 ZNF654Q8IZM8 581 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 SDR42E1Q8WUS8 393 aa14.67□□□□□ -0.06
SCN8A-202ENST00000355133 TUBBP07437 444 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 PPP2R5CQ13362 524 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 MTX1Q13505 466 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 DAAM2Q86T65 1068 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 TTLL3Q9Y4R7 772 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 IGSF3O75054 1194 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 GMNNO75496 209 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 BCRP11274 1271 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 FAM102BQ5T8I3 360 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 METTL13Q8N6R0 699 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 TTLL7Q6ZT98 887 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
SCN8A-202ENST00000355133 SFMBT2Q5VUG0 894 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 SLF1Q9BQI6 1058 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 PCDHB13Q9Y5F0 798 aa14.66□□□□□ -0.06
SCN8A-202ENST00000355133 ARHGEF16Q5VV41 709 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 C17orf53Q8N3J3 647 aaPredicted RBP14.65□□□□□ -0.06
SCN8A-202ENST00000355133 ZSCAN10Q96SZ4 725 aaPredicted RBP14.65□□□□□ -0.06
SCN8A-202ENST00000355133 CARD6Q9BX69 1037 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 ALAS1P13196 640 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 BEGAINQ9BUH8 593 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 ZMYND15Q9H091 742 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 NLRC4Q9NPP4 1024 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 TCOF1Q13428 1488 aaKnown RBP14.65□□□□□ -0.06
SCN8A-202ENST00000355133 LRRC47Q8N1G4 583 aaKnown RBP14.65□□□□□ -0.06
SCN8A-202ENST00000355133 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.65□□□□□ -0.06
SCN8A-202ENST00000355133 STIM2Q9P246 746 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 CSADQ9Y600 493 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 CYP2J2P51589 502 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 TYW1BQ6NUM6 668 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 CHURC1Q8WUH1 139 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 KDM2BQ8NHM5 1336 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 GOLGA8HP0CJ92 632 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 ME3Q16798 604 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 PRR16Q569H4 304 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 RRAGAQ7L523 313 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 KIAA0825Q8IV33 1275 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 VPS52Q8N1B4 723 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 DEPTORQ8TB45 409 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 ANO3Q9BYT9 981 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
SCN8A-202ENST00000355133 CEP128Q6ZU80 1094 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 GPBP1Q86WP2 473 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 TMTC1Q8IUR5 882 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 IFNL3Q8IZI9 196 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 HGSO14964 777 aaPredicted RBP14.64□□□□□ -0.07
SCN8A-202ENST00000355133 TECP42680 631 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 CASC4Q6P4E1 433 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 IFT20Q8IY31 132 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 PHKG2P15735 406 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 BAG6P46379 1132 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms