RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 PACSIN2Q9UNF0 486 aaPredicted RBP8.85□□□□□ -0.99
HTT-201ENST00000355072 ABCA9Q8IUA7 1624 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 MMEP08473 750 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 IGSF22Q8N9C0 903 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CNPY3Q9BT09 278 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 MPP6Q9NZW5 540 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CCDC78A2IDD5 438 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 SATB1Q01826 763 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 ARHGEF5Q12774 1597 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 KRT8P05787 483 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 HPDP32754 393 aaPredicted RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 INPP1P49441 399 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 DNAJC17Q9NVM6 304 aaKnown RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 ABCA8O94911 1581 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 TTC4O95801 387 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 TUBA8Q9NY65 449 aaPredicted RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 PPP2R5DQ14738 602 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 DONSONQ9NYP3 566 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 TRIM33Q9UPN9 1127 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 CRCPO75575 148 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 KRT16P08779 473 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 TRAPPC10P48553 1259 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 THOC1Q96FV9 657 aaKnown RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 BAG5Q9UL15 447 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 BLOC1S6Q9UL45 172 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 CAV1Q03135 178 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 FLIIQ13045 1269 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 PHKBQ93100 1093 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 ZNF280CQ8ND82 737 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 CDKL2Q92772 493 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 ESRRBO95718 433 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 SYCP2LQ5T4T6 812 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 CABP4P57796 275 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 WDR44Q5JSH3 913 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 ABTB2Q8N961 1025 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
HTT-201ENST00000355072 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 ZBTB43O43298 467 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 SESN3P58005 492 aa8.84□□□□□ -0.99
HTT-201ENST00000355072 EEF1GP26641 437 aaKnown RBP8.84□□□□□ -1
HTT-201ENST00000355072 STRN3Q13033 797 aa8.84□□□□□ -1
HTT-201ENST00000355072 RPS6KA1Q15418 735 aa8.84□□□□□ -1
HTT-201ENST00000355072 TMEM67Q5HYA8 995 aa8.84□□□□□ -1
HTT-201ENST00000355072 TARSL2A2RTX5 802 aaKnown RBP8.83□□□□□ -1
HTT-201ENST00000355072 ATP2B1P20020 1258 aa8.83□□□□□ -1
HTT-201ENST00000355072 ADCY2Q08462 1091 aa8.83□□□□□ -1
HTT-201ENST00000355072 CCDC93Q567U6 631 aa8.83□□□□□ -1
HTT-201ENST00000355072 NBPF5PQ86XG9 351 aaPredicted RBP8.83□□□□□ -1
HTT-201ENST00000355072 SSH1Q8WYL5 1049 aa8.83□□□□□ -1
HTT-201ENST00000355072 GOLGA8JA6NMD2 632 aa8.83□□□□□ -1
HTT-201ENST00000355072 FOSBP53539 338 aa8.83□□□□□ -1
HTT-201ENST00000355072 TMTC3Q6ZXV5 915 aa8.83□□□□□ -1
HTT-201ENST00000355072 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
HTT-201ENST00000355072 GRAMD1AQ96CP6 724 aa8.83□□□□□ -1
HTT-201ENST00000355072 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
HTT-201ENST00000355072 PRAG1Q86YV5 1406 aa8.83□□□□□ -1
HTT-201ENST00000355072 PODXLO00592 558 aa8.83□□□□□ -1
HTT-201ENST00000355072 DNM2P50570 870 aa8.83□□□□□ -1
HTT-201ENST00000355072 GRAMD4Q6IC98 578 aa8.83□□□□□ -1
HTT-201ENST00000355072 SV2BQ7L1I2 683 aa8.83□□□□□ -1
HTT-201ENST00000355072 TEX12Q9BXU0 123 aa8.83□□□□□ -1
HTT-201ENST00000355072 UPF3AQ9H1J1 476 aaKnown RBP8.83□□□□□ -1
HTT-201ENST00000355072 ZNF75DP51815 510 aa8.83□□□□□ -1
HTT-201ENST00000355072 SLC20A2Q08357 652 aa8.83□□□□□ -1
HTT-201ENST00000355072 ILF2Q12905 390 aaKnown RBP8.83□□□□□ -1
HTT-201ENST00000355072 WTAPQ15007 396 aa8.83□□□□□ -1
HTT-201ENST00000355072 ELF2Q15723 593 aa8.83□□□□□ -1
HTT-201ENST00000355072 TADA2BQ86TJ2 420 aa8.83□□□□□ -1
HTT-201ENST00000355072 ORC3Q9UBD5 711 aaPredicted RBP8.83□□□□□ -1
HTT-201ENST00000355072 MYH7P12883 1935 aa8.83□□□□□ -1
HTT-201ENST00000355072 IFIT3O14879 490 aaKnown RBP8.83□□□□□ -1
HTT-201ENST00000355072 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
HTT-201ENST00000355072 KDM5CP41229 1560 aa8.83□□□□□ -1
HTT-201ENST00000355072 EFCAB14O75071 495 aa8.83□□□□□ -1
HTT-201ENST00000355072 CCT6BQ92526 530 aa8.83□□□□□ -1
HTT-201ENST00000355072 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
HTT-201ENST00000355072 IGBP1P78318 339 aa8.83□□□□□ -1
HTT-201ENST00000355072 DTX3LQ8TDB6 740 aa8.83□□□□□ -1
HTT-201ENST00000355072 TMEM60Q9H2L4 133 aa8.83□□□□□ -1
HTT-201ENST00000355072 HACD3Q9P035 362 aa8.83□□□□□ -1
HTT-201ENST00000355072 IDH1O75874 414 aaKnown RBP8.83□□□□□ -1
HTT-201ENST00000355072 KRT71Q3SY84 523 aa8.83□□□□□ -1
HTT-201ENST00000355072 TTLL7Q6ZT98 887 aa8.83□□□□□ -1
HTT-201ENST00000355072 PNMA8AQ86V59 439 aaPredicted RBP8.83□□□□□ -1
HTT-201ENST00000355072 MKNK2Q9HBH9 465 aa8.83□□□□□ -1
HTT-201ENST00000355072 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
HTT-201ENST00000355072 ANKRD44Q8N8A2 993 aa8.83□□□□□ -1
HTT-201ENST00000355072 C10orf88Q9H8K7 445 aa8.83□□□□□ -1
HTT-201ENST00000355072 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
HTT-201ENST00000355072 RTN1Q16799 776 aa8.83□□□□□ -1
HTT-201ENST00000355072 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
HTT-201ENST00000355072 AGTPBP1Q9UPW5 1226 aa8.83□□□□□ -1
HTT-201ENST00000355072 ABCC5O15440 1437 aa8.82□□□□□ -1
HTT-201ENST00000355072 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
HTT-201ENST00000355072 OPHN1O60890 802 aa8.82□□□□□ -1
HTT-201ENST00000355072 KPNB1Q14974 876 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms